RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 CDC42SE2Q9NRR3 84 aa5.62□□□□□ -1.51
SMARCA2-252ENST00000636559 RNASE8Q8TDE3 154 aaKnown RBP5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 LY6G6CO95867 125 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 TMEM258P61165 79 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 TRBV30A0A0K0K1B3 111 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 G3V4G9 280 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 BPY2O14599 106 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 RETNQ9HD89 108 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 IGKV2-28A0A075B6P5 120 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 IGKV2D-28P01615 120 aa5.61□□□□□ -1.51
SMARCA2-252ENST00000636559 B5MCH6 92 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 LINC00643Q86TS7 51 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 SMIM20Q8N5G0 67 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 COL4A2P08572 1712 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 C1orf158Q8N1D5 194 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 TEX49A0A1B0GTD5 131 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 M0R378 163 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 LOC107984640A0A0U1RRK4 108 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 WFDC9Q8NEX5 89 aa5.6□□□□□ -1.51
SMARCA2-252ENST00000636559 COX17Q14061 63 aa5.59□□□□□ -1.51
SMARCA2-252ENST00000636559 Q8IZM0 81 aa5.59□□□□□ -1.51
SMARCA2-252ENST00000636559 ABCA12Q86UK0 2595 aa5.59□□□□□ -1.51
SMARCA2-252ENST00000636559 JMJD1CQ15652 2540 aa5.59□□□□□ -1.51
SMARCA2-252ENST00000636559 ZFYVE26Q68DK2 2539 aa5.59□□□□□ -1.51
SMARCA2-252ENST00000636559 UPK3BQ9BT76 320 aa5.58□□□□□ -1.52
SMARCA2-252ENST00000636559 COX8CQ7Z4L0 72 aa5.58□□□□□ -1.52
SMARCA2-252ENST00000636559 TLN2Q9Y4G6 2542 aa5.58□□□□□ -1.52
SMARCA2-252ENST00000636559 NUPR2A6NF83 97 aa5.58□□□□□ -1.52
SMARCA2-252ENST00000636559 C2orf91Q6ZV80 131 aa5.58□□□□□ -1.52
SMARCA2-252ENST00000636559 SPTBN4Q9H254 2564 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 FHL2Q14192 279 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 CYSRT1A8MQ03 144 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 DHRS4-AS1Q9P1J3 65 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 USP9XQ93008 2570 aaPredicted RBP5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 CHCHD7Q9BUK0 85 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 Q6ZTC4 211 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 POM121L12Q8N7R1 296 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 MUC7Q8TAX7 377 aa5.57□□□□□ -1.52
SMARCA2-252ENST00000636559 RPL37AP8A6NKH3 93 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 SMIM11BQ8TCY0 68 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 Q6ZQY7 126 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 LINC00474Q9P2X8 69 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 CCKP06307 115 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 LRRK2Q5S007 2527 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 IGKV4-1P06312 121 aa5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 ZNF706Q9Y5V0 76 aaPredicted RBP5.56□□□□□ -1.52
SMARCA2-252ENST00000636559 URB1-AS1Q96HZ7 61 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 BEAN1Q3B7T3 259 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 C5orf47Q569G3 176 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 SCXQ7RTU7 201 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 CHD8Q9HCK8 2581 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 ZNF73O43830 326 aaPredicted RBP5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 LINC00694P0DN24 101 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 LINC00310P59036 64 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 UNQ6190/PRO20217Q6UXQ8 127 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 Q8N2B8 174 aa5.55□□□□□ -1.52
SMARCA2-252ENST00000636559 SMIM1B2RUZ4 78 aa5.54□□□□□ -1.52
SMARCA2-252ENST00000636559 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
SMARCA2-252ENST00000636559 FN1P02751 2386 aaKnown RBP5.54□□□□□ -1.52
SMARCA2-252ENST00000636559 LST1O00453 97 aa5.54□□□□□ -1.52
SMARCA2-252ENST00000636559 COX6A2Q02221 97 aa5.54□□□□□ -1.52
SMARCA2-252ENST00000636559 EGFEM1PQ0D2K5 195 aa5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 TET2Q6N021 2002 aaPredicted RBP5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 PLAC8L1A1L4L8 177 aa5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 ENHOQ6UWT2 76 aa5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 Q6ZSN1 163 aa5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 CSDC2Q9Y534 153 aaKnown RBP5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 C3orf84H3BNL1 204 aa5.53□□□□□ -1.52
SMARCA2-252ENST00000636559 USP9YO00507 2555 aaPredicted RBP5.52□□□□□ -1.53
SMARCA2-252ENST00000636559 C9orf116Q5BN46 136 aaPredicted RBP5.52□□□□□ -1.53
SMARCA2-252ENST00000636559 MT-ATP8P03928 68 aa5.52□□□□□ -1.53
SMARCA2-252ENST00000636559 AGRNO00468 2067 aa5.52□□□□□ -1.53
SMARCA2-252ENST00000636559 AMELXQ99217 191 aa5.52□□□□□ -1.53
SMARCA2-252ENST00000636559 ZNF462Q96JM2 2506 aa5.51□□□□□ -1.53
SMARCA2-252ENST00000636559 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.51□□□□□ -1.53
SMARCA2-252ENST00000636559 M0QXV9 152 aa5.51□□□□□ -1.53
SMARCA2-252ENST00000636559 WFDC10BQ8IUB3 73 aa5.51□□□□□ -1.53
SMARCA2-252ENST00000636559 PTPRBP23467 1997 aa5.51□□□□□ -1.53
SMARCA2-252ENST00000636559 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 A0A1B0GUV1 79 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 LYPD5Q6UWN5 251 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 C6orf223Q8N319 242 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 DOPEY1Q5JWR5 2465 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 NDUFV3P56181 108 aaKnown RBP5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 SETD2Q9BYW2 2564 aaPredicted RBP5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 TSPEAR-AS2P59090 65 aa5.5□□□□□ -1.53
SMARCA2-252ENST00000636559 C20orf197Q8N268 126 aa5.49□□□□□ -1.53
SMARCA2-252ENST00000636559 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
SMARCA2-252ENST00000636559 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
SMARCA2-252ENST00000636559 J3KT08 172 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms