RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NAGKQ9UJ70 344 aa1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 PAIP2BQ9ULR5 123 aaKnown RBP1.34□□□□□ -2.19
SMARCB1-208ENST00000634926 MUC17Q685J3 4493 aa1.34□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A087WWC5 75 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TRAV21A0A0B4J279 112 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 F6UZH7 168 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 LYRM1O43325 122 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 PSCAO43653 123 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-33P01772 117 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TCRBP04435 133 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-30-3P0DP02 117 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 MP68P56378 58 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 UBE2D3P61077 147 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 RPL37AP61513 92 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 UBE2D2P62837 147 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 GNG5P63218 68 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 UBE2L3P68036 154 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 ACOT6Q3I5F7 207 aaPredicted RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 KHDC3LQ587J8 217 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 SDIM1Q6ZPB5 146 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 GOLT1AQ6ZVE7 132 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 FAM19A3Q7Z5A8 133 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 STX12Q86Y82 276 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 C12orf45Q8N5I9 185 aaPredicted RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TMEM75Q8N9X5 138 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 OR5C1Q8NGR4 320 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 ATP6V0E2Q8NHE4 81 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 ASB13Q8WXK3 278 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 SMIM12Q96EX1 92 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 C2orf50Q96LR7 162 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 LINC01600Q96MT4 127 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 NMES1Q9C002 83 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 SPANXB1Q9NS25 103 aaPredicted RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 KCNIP2Q9NS61 270 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 PLAC8Q9NZF1 115 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 IL36BQ9NZH7 164 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 OR5AC2Q9NZP5 309 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 GSKIPQ9P0R6 139 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 LSM5Q9Y4Y9 91 aaKnown RBP1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TIMM9Q9Y5J7 89 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TRAPPC1Q9Y5R8 145 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV10-1A0A0K0K1A3 114 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 A8MWP4 228 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 A8MWV9 139 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 TCRAP04437 139 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 CXCL1P09341 107 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 ARL14EPLP0DKL9 152 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 CRIP1P50238 77 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 RAB2AP61019 212 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 RANP62826 216 aaKnown RBP1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 RPL19P84098 196 aaKnown RBP1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 C4orf26Q17RF5 130 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 TRIQKQ629K1 86 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 TMEM136Q6ZRR5 245 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 Q86TA4 180 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 C5orf17Q8NAS9 161 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 PRADC1Q9BSG0 188 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 MED28Q9H204 178 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 HSPB11Q9Y547 144 aa1.32□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV7-3A0A075B6L6 115 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV6-8A0A0A6YYG3 113 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-73A0A0B4J1V6 119 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 MUC21A0A0G2JKD1 596 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV6-1A0A0K0K1D8 114 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A1W2PRE2 83 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 G3V3Q6 166 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 H3BQ85 93 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 H3BVH4 76 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 MPC2O95563 127 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 LTAP01374 205 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 GCHFRP30047 84 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 S100A5P33763 92 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 CSN1S1P47710 185 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 TAS2R45P59539 299 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 S100A10P60903 97 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 FLI1Q01543 452 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 Q0VG73 95 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 MIAQ16674 131 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 IQCJQ1A5X6 159 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 CENPWQ5EE01 88 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 LINC00299Q6ZSB3 139 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 FAM19A5Q7Z5A7 132 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 FER1L6-AS1Q8NA97 138 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 C1orf64Q8NEQ6 169 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 PPP1R1CQ8WVI7 109 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 ZC2HC1AQ96GY0 325 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 SFRP2Q96HF1 295 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 PSMG3Q9BT73 122 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 CCDC32Q9BV29 185 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 ARL2-SNX15V9GYD0 113 aa1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 FLGP20930 4061 aaPredicted RBP1.31□□□□□ -2.2
SMARCB1-208ENST00000634926 GVQW2A0A096LPI5 108 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 TINCRA0A1B0GVN0 87 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 C17orf112F2Z3M2 114 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 SH2D1AO60880 128 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 SIX6O95475 246 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms