RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 TEX43Q6ZNM6 134 aa13.4□□□□□ -0.26
SF1-221ENST00000633899 FAM104AQ969W3 186 aa13.4□□□□□ -0.26
SF1-221ENST00000633899 LINC00526Q96FQ7 95 aa13.4□□□□□ -0.26
SF1-221ENST00000633899 C2orf88Q9BSF0 95 aa13.4□□□□□ -0.26
SF1-221ENST00000633899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.4□□□□□ -0.26
SF1-221ENST00000633899 CARD19Q96LW7 228 aa13.39□□□□□ -0.27
SF1-221ENST00000633899 PKIGQ9Y2B9 76 aa13.39□□□□□ -0.27
SF1-221ENST00000633899 INAFM2P0DMQ5 153 aa13.38□□□□□ -0.27
SF1-221ENST00000633899 ALKBH7Q9BT30 221 aaPredicted RBP13.38□□□□□ -0.27
SF1-221ENST00000633899 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
SF1-221ENST00000633899 COX6A2Q02221 97 aa13.37□□□□□ -0.27
SF1-221ENST00000633899 SYCNQ0VAF6 134 aa13.36□□□□□ -0.27
SF1-221ENST00000633899 VCX2Q9H322 139 aa13.36□□□□□ -0.27
SF1-221ENST00000633899 IGLV4-69A0A075B6H9 119 aa13.35□□□□□ -0.27
SF1-221ENST00000633899 NPSP0C0P6 89 aa13.35□□□□□ -0.27
SF1-221ENST00000633899 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
SF1-221ENST00000633899 TRAPPC1Q9Y5R8 145 aa13.35□□□□□ -0.27
SF1-221ENST00000633899 IGHV3OR16-9A0A0B4J2B5 98 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 PANO1I0J062 215 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 SPAG11BQ08648 103 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 PAPPA-AS1Q5QFB9 102 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 FA2HQ7L5A8 372 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 VPS13BQ7Z7G8 4022 aa13.34□□□□□ -0.27
SF1-221ENST00000633899 IGKV2-24A0A0C4DH68 120 aa13.33□□□□□ -0.28
SF1-221ENST00000633899 OR10D4PQ8NGN7 298 aa13.33□□□□□ -0.28
SF1-221ENST00000633899 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
SF1-221ENST00000633899 CIRBPQ14011 172 aaKnown RBP13.32□□□□□ -0.28
SF1-221ENST00000633899 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
SF1-221ENST00000633899 TOMM6Q96B49 74 aa13.32□□□□□ -0.28
SF1-221ENST00000633899 IGIPA6NJ69 53 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 UBE2D1P51668 147 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 LINC00242Q5T6M2 205 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 C2orf48Q96LS8 159 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 AMELXQ99217 191 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 TIMM17AQ99595 171 aa13.31□□□□□ -0.28
SF1-221ENST00000633899 LINC01549A6NIU2 74 aa13.3□□□□□ -0.28
SF1-221ENST00000633899 MAJINQ3KP22 176 aa13.3□□□□□ -0.28
SF1-221ENST00000633899 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
SF1-221ENST00000633899 SCGB3A1Q96QR1 104 aa13.3□□□□□ -0.28
SF1-221ENST00000633899 A0A087WYN8 130 aa13.29□□□□□ -0.28
SF1-221ENST00000633899 Q6ZRU5 148 aa13.29□□□□□ -0.28
SF1-221ENST00000633899 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
SF1-221ENST00000633899 ERASQ7Z444 233 aa13.28□□□□□ -0.28
SF1-221ENST00000633899 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
SF1-221ENST00000633899 A0A087WZ39 114 aa13.27□□□□□ -0.29
SF1-221ENST00000633899 A0A096LNI7 61 aa13.27□□□□□ -0.29
SF1-221ENST00000633899 LINC01546A6NGU7 62 aa13.27□□□□□ -0.29
SF1-221ENST00000633899 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
SF1-221ENST00000633899 F8WDY8 70 aa13.26□□□□□ -0.29
SF1-221ENST00000633899 RPL37AP61513 92 aaKnown RBP13.26□□□□□ -0.29
SF1-221ENST00000633899 SEC11AP67812 179 aa13.26□□□□□ -0.29
SF1-221ENST00000633899 SRRM2Q9UQ35 2752 aaKnown RBP13.26□□□□□ -0.29
SF1-221ENST00000633899 NDUFA1O15239 70 aa13.25□□□□□ -0.29
SF1-221ENST00000633899 HERVK_113P63121 156 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 GAGE2BQ13066 116 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 SLC7A5P1Q8MH63 180 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 STPG4Q8N801 248 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 C18orf32Q8TCD1 76 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 GEMIN7Q9H840 131 aaKnown RBP13.24□□□□□ -0.29
SF1-221ENST00000633899 PLAC8Q9NZF1 115 aa13.24□□□□□ -0.29
SF1-221ENST00000633899 LINC01561Q8N1V8 128 aa13.23□□□□□ -0.29
SF1-221ENST00000633899 RAB5BP61020 215 aa13.22□□□□□ -0.29
SF1-221ENST00000633899 RPL18AQ02543 176 aaKnown RBP13.22□□□□□ -0.29
SF1-221ENST00000633899 C7orf33Q8WU49 177 aa13.22□□□□□ -0.29
SF1-221ENST00000633899 MRPL35Q9NZE8 188 aaKnown RBP13.22□□□□□ -0.29
SF1-221ENST00000633899 PRSS2P07478 247 aa13.21□□□□□ -0.29
SF1-221ENST00000633899 LINC00614P0C842 121 aa13.21□□□□□ -0.29
SF1-221ENST00000633899 PTTG1IPP53801 180 aa13.21□□□□□ -0.29
SF1-221ENST00000633899 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
SF1-221ENST00000633899 FAM19A3Q7Z5A8 133 aa13.21□□□□□ -0.29
SF1-221ENST00000633899 PACRGQ96M98 296 aaPredicted RBP13.21□□□□□ -0.29
SF1-221ENST00000633899 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
SF1-221ENST00000633899 YPEL4Q96NS1 127 aa13.2□□□□□ -0.3
SF1-221ENST00000633899 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
SF1-221ENST00000633899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.19□□□□□ -0.3
SF1-221ENST00000633899 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
SF1-221ENST00000633899 PMVKQ15126 192 aa13.18□□□□□ -0.3
SF1-221ENST00000633899 HBDP02042 147 aa13.17□□□□□ -0.3
SF1-221ENST00000633899 UNQ6190/PRO20217Q6UXQ8 127 aa13.17□□□□□ -0.3
SF1-221ENST00000633899 LINC00469Q8N7U9 141 aa13.17□□□□□ -0.3
SF1-221ENST00000633899 CDKN2A-AS1Q9UH64 79 aa13.17□□□□□ -0.3
SF1-221ENST00000633899 FLG2Q5D862 2391 aaPredicted RBP13.17□□□□□ -0.3
SF1-221ENST00000633899 KRTAP10-4P60372 401 aaPredicted RBP13.16□□□□□ -0.3
SF1-221ENST00000633899 KIAA0087Q14695 138 aa13.16□□□□□ -0.3
SF1-221ENST00000633899 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
SF1-221ENST00000633899 URB1-AS1Q96HZ7 61 aa13.16□□□□□ -0.3
SF1-221ENST00000633899 CST9LQ9H4G1 147 aa13.16□□□□□ -0.3
SF1-221ENST00000633899 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
SF1-221ENST00000633899 NDUFA6P56556 154 aa13.15□□□□□ -0.3
SF1-221ENST00000633899 CKS1BP61024 79 aa13.15□□□□□ -0.3
SF1-221ENST00000633899 C6orf48Q9UBA6 75 aa13.15□□□□□ -0.3
SF1-221ENST00000633899 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
SF1-221ENST00000633899 PMCHL1Q16048 86 aa13.14□□□□□ -0.31
SF1-221ENST00000633899 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
SF1-221ENST00000633899 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
SF1-221ENST00000633899 Q8IZM0 81 aa13.13□□□□□ -0.31
SF1-221ENST00000633899 A0A096LNJ9 63 aa13.12□□□□□ -0.31
SF1-221ENST00000633899 ATP5LO75964 103 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms