RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
SDCBP-213ENST00000630925 A0A087WSZ3 146 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 PRB4P10163 310 aaPredicted RBP3.13□□□□□ -1.91
SDCBP-213ENST00000630925 ZNF791Q3KP31 576 aaPredicted RBP3.13□□□□□ -1.91
SDCBP-213ENST00000630925 ZNF826PQ6ZT77 177 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 VMO1Q7Z5L0 202 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 GTF3C1Q12789 2109 aa3.13□□□□□ -1.91
SDCBP-213ENST00000630925 CSPG4Q6UVK1 2322 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 C11orf86A6NJI1 115 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 CFC1P0CG37 223 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 COX8AP10176 69 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 MGST1P10620 155 aaKnown RBP3.12□□□□□ -1.91
SDCBP-213ENST00000630925 DEFB121Q5J5C9 76 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 CASC2Q6XLA1 102 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 DEFB107AQ8IZN7 70 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 C14orf132Q9NPU4 83 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 TACC2O95359 2948 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 TRBV7-1A0A0A6YYK4 115 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 TRBV10-3A0A0K0K1G6 114 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 IGLV2-11P01706 119 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 UBE2D3P61077 147 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 UBE2D2P62837 147 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 ZNF56Q15929 161 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 Q6ZR03 302 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 DEFB106AQ8N104 65 aa3.12□□□□□ -1.91
SDCBP-213ENST00000630925 E7EUB6 86 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 IGKV3-11P04433 115 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 C3orf79P0CE67 100 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 IGLV3-21P80748 117 aaPredicted RBP3.11□□□□□ -1.91
SDCBP-213ENST00000630925 TIMM21Q9BVV7 248 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 MANBALQ9NQG1 85 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 ACANP16112 2415 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 CEP192Q8TEP8 1941 aa3.11□□□□□ -1.91
SDCBP-213ENST00000630925 NOTCH1P46531 2555 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 IGHV1-18A0A0C4DH31 117 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 A6NIN4 97 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 Q5W150 140 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 FAM167A-AS1Q96KT0 104 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 RNF5Q99942 180 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 RTTNQ86VV8 2226 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 BIRC6Q9NR09 4857 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 SDK2Q58EX2 2172 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 TRAV22A0A0B4J277 110 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 A0A1W2PNU3 283 aaPredicted RBP3.1□□□□□ -1.91
SDCBP-213ENST00000630925 A8MU10 97 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 IGHV3-53P01767 116 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 IL4P05112 153 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 MIR22HGQ0VDD5 57 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 MOBPQ13875 183 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 TVP23CQ96ET8 276 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 S4R3C0 116 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 ANK2Q01484 3957 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 DCHS2Q6V1P9 2916 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 KNTC1P50748 2209 aa3.1□□□□□ -1.91
SDCBP-213ENST00000630925 TGP01266 2768 aa3.09□□□□□ -1.91
SDCBP-213ENST00000630925 Q5VV11 94 aa3.09□□□□□ -1.91
SDCBP-213ENST00000630925 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
SDCBP-213ENST00000630925 NUP214P35658 2090 aaPredicted RBP3.08□□□□□ -1.92
SDCBP-213ENST00000630925 IGLV10-54A0A075B6I4 117 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 HMGA1P17096 107 aaKnown RBP3.08□□□□□ -1.92
SDCBP-213ENST00000630925 SMIM11AP58511 58 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 Q8N6K4 173 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 PRO1854Q9UHT4 67 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 TP53TG3Q9ULZ0 132 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 MINOS1-NBL1R4GNA1 71 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 COL27A1Q8IZC6 1860 aaPredicted RBP3.08□□□□□ -1.92
SDCBP-213ENST00000630925 CXorf51AA0A1B0GTR3 108 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 Q8NAQ8 132 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 CCL26Q9Y258 94 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 DOCK11Q5JSL3 2073 aa3.08□□□□□ -1.92
SDCBP-213ENST00000630925 MXRA5Q9NR99 2828 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 TRBV7-3A0A075B6L6 115 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 TFF1P04155 84 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 KRTAP10-9P60411 292 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 CYB561D1Q8N8Q1 229 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 TYMSOSQ8TAI1 123 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 HILPDAQ9Y5L2 63 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 A0A096LNJ9 63 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 IGKV3D-11A0A0A0MRZ8 115 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 SNRPGP15A8MWD9 76 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 FXYD1O00168 92 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 Q8TAT8 98 aa3.07□□□□□ -1.92
SDCBP-213ENST00000630925 EPPK1P58107 5090 aaKnown RBP3.06□□□□□ -1.92
SDCBP-213ENST00000630925 TRBV25-1A0A075B6N4 114 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 TEX49A0A1B0GTD5 131 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 A0A1B0GU33 70 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 SDHAF1A6NFY7 115 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 IQCF6A8MYZ5 107 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 MIFP14174 115 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 DEFB113Q30KQ7 82 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 NCBP2-AS2Q69YL0 99 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 LYPD6Q86Y78 171 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 CPAMD8Q8IZJ3 1885 aa3.06□□□□□ -1.92
SDCBP-213ENST00000630925 RP1L1Q8IWN7 2480 aaPredicted RBP3.06□□□□□ -1.92
SDCBP-213ENST00000630925 IGLV3-16A0A075B6K0 115 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 FXYD6-FXYD2A0A087WZ82 144 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 C10orf142B7Z368 130 aa3.05□□□□□ -1.92
SDCBP-213ENST00000630925 H7C423 109 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms