RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CPAMD8Q8IZJ3 1885 aa6.77□□□□□ -1.33
GGA3-223ENST00000621870 CRIP2P52943 208 aaPredicted RBP6.77□□□□□ -1.33
GGA3-223ENST00000621870 HIGD2AQ9BW72 106 aa6.77□□□□□ -1.33
GGA3-223ENST00000621870 RS1O15537 224 aa6.77□□□□□ -1.33
GGA3-223ENST00000621870 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 PTPRBP23467 1997 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 FLNCQ14315 2725 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 TAX1BP3O14907 124 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 NBEAL1Q6ZS30 2694 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 IGSF10Q6WRI0 2623 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 CRYBA4P53673 196 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 LINC00310P59036 64 aa6.76□□□□□ -1.33
GGA3-223ENST00000621870 IGLV4-3A0A075B6K6 122 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 C16orf95Q9H693 158 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 BAALC-AS2P0C853 105 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
GGA3-223ENST00000621870 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 FXYD2P54710 66 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 MRGPRG-AS1Q2M3A8 158 aa6.75□□□□□ -1.33
GGA3-223ENST00000621870 A0A096LNI7 61 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 ORMDL1Q9P0S3 153 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 A0A087WZ39 114 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 C4orf48Q5BLP8 95 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
GGA3-223ENST00000621870 Q6ZTC4 211 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 COL4A2P08572 1712 aa6.74□□□□□ -1.33
GGA3-223ENST00000621870 UFSP1Q6NVU6 142 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 H0YGX0 51 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 K7EP34 96 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 RBMY1FQ15415 496 aaKnown RBP6.73□□□□□ -1.33
GGA3-223ENST00000621870 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 UNC79Q9P2D8 2635 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 SYCNQ0VAF6 134 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 DIRC1Q969H9 104 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
GGA3-223ENST00000621870 GAS8-AS1O95177 125 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 LELP1Q5T871 98 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 C1orf158Q8N1D5 194 aa6.73□□□□□ -1.33
GGA3-223ENST00000621870 KALRNO60229 2985 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 MRPS12O15235 138 aaKnown RBP6.72□□□□□ -1.33
GGA3-223ENST00000621870 MIAQ16674 131 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 PPDPFLQ8WWR9 84 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 B5MCH6 92 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 G3V4G9 280 aa6.72□□□□□ -1.33
GGA3-223ENST00000621870 FUSP35637 526 aaKnown RBP eCLIP6.72□□□□□ -1.33
GGA3-223ENST00000621870 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
GGA3-223ENST00000621870 ZNF580Q9UK33 172 aa6.71□□□□□ -1.34
GGA3-223ENST00000621870 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 A8MZ25 164 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 NFE4Q86UQ8 179 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 POLR2KP53803 58 aaKnown RBP6.7□□□□□ -1.34
GGA3-223ENST00000621870 FAM19A5Q7Z5A7 132 aaPredicted RBP6.7□□□□□ -1.34
GGA3-223ENST00000621870 LAMA5O15230 3695 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 DCHS1Q96JQ0 3298 aa6.7□□□□□ -1.34
GGA3-223ENST00000621870 UBR5O95071 2799 aaPredicted RBP6.69□□□□□ -1.34
GGA3-223ENST00000621870 A0A0J9YXY3 114 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 F8W1H4 67 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 NDUFS5O43920 106 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 H7C423 109 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 TSHBP01222 138 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 PIK3CD-AS1Q5SR53 167 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 C9orf153Q5TBE3 101 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 SPATA12Q7Z6I5 190 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 NRACQ8N912 160 aa6.69□□□□□ -1.34
GGA3-223ENST00000621870 ADGRG4Q8IZF6 3080 aa6.68□□□□□ -1.34
GGA3-223ENST00000621870 TRACP01848 142 aa6.68□□□□□ -1.34
GGA3-223ENST00000621870 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
GGA3-223ENST00000621870 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
GGA3-223ENST00000621870 LINC00959A0A1B0GUT2 108 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 UBE2D3P61077 147 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 UBE2D2P62837 147 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 CLEC2BQ92478 149 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 FAM19A1Q7Z5A9 133 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 HIGD1BQ9P298 99 aa6.67□□□□□ -1.34
GGA3-223ENST00000621870 COX7BP24311 80 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 LINC01620Q4KN68 170 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 NUPR2A6NF83 97 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 ANKRD29Q8N6D5 301 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 B9D2Q9BPU9 175 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 IGKV2-28A0A075B6P5 120 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 IGKV2D-28P01615 120 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 PYGO1Q9Y3Y4 419 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 U3KQK5 164 aa6.66□□□□□ -1.34
GGA3-223ENST00000621870 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
GGA3-223ENST00000621870 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.35
GGA3-223ENST00000621870 TACC2O95359 2948 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 NREPQ16612 68 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 Q8N2B8 174 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 CNFNQ9BYD5 112 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 FOXI1Q12951 378 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 C7orf33Q8WU49 177 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 TMEM223A0PJW6 202 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 NDUFB1O75438 58 aa6.64□□□□□ -1.35
GGA3-223ENST00000621870 PCSK5Q92824 1860 aa6.63□□□□□ -1.35
GGA3-223ENST00000621870 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms