RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 IMMP2LQ96T52 175 aa7.4□□□□□ -1.22
UPF3B-204ENST00000619445 SMIM2Q9BVW6 85 aa7.4□□□□□ -1.22
UPF3B-204ENST00000619445 TNFRSF6BO95407 300 aa7.39□□□□□ -1.23
UPF3B-204ENST00000619445 HBBP68871 147 aa7.39□□□□□ -1.23
UPF3B-204ENST00000619445 MRPS36P82909 103 aaKnown RBP7.39□□□□□ -1.23
UPF3B-204ENST00000619445 C5orf38Q86SI9 138 aa7.39□□□□□ -1.23
UPF3B-204ENST00000619445 MRPL35Q9NZE8 188 aaKnown RBP7.39□□□□□ -1.23
UPF3B-204ENST00000619445 TNXBP22105 4242 aa7.39□□□□□ -1.23
UPF3B-204ENST00000619445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.38□□□□□ -1.23
UPF3B-204ENST00000619445 MT-ND6P03923 174 aa7.38□□□□□ -1.23
UPF3B-204ENST00000619445 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
UPF3B-204ENST00000619445 RPL18AQ02543 176 aaKnown RBP7.38□□□□□ -1.23
UPF3B-204ENST00000619445 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
UPF3B-204ENST00000619445 IGHV3OR16-9A0A0B4J2B5 98 aa7.37□□□□□ -1.23
UPF3B-204ENST00000619445 NDUFA1O15239 70 aa7.37□□□□□ -1.23
UPF3B-204ENST00000619445 RAB5AP20339 215 aa7.37□□□□□ -1.23
UPF3B-204ENST00000619445 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
UPF3B-204ENST00000619445 ATP5L2Q7Z4Y8 100 aa7.37□□□□□ -1.23
UPF3B-204ENST00000619445 TGIF2-C20orf24A0A0A6YYL0 155 aa7.36□□□□□ -1.23
UPF3B-204ENST00000619445 D6R8Y8 96 aa7.36□□□□□ -1.23
UPF3B-204ENST00000619445 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
UPF3B-204ENST00000619445 ORMDL3Q8N138 153 aa7.36□□□□□ -1.23
UPF3B-204ENST00000619445 ORAOV1Q8WV07 137 aa7.36□□□□□ -1.23
UPF3B-204ENST00000619445 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
UPF3B-204ENST00000619445 A0A1W2PNN7 141 aa7.35□□□□□ -1.23
UPF3B-204ENST00000619445 IFITM10A6NMD0 228 aa7.35□□□□□ -1.23
UPF3B-204ENST00000619445 IFI27P40305 119 aaPredicted RBP7.35□□□□□ -1.23
UPF3B-204ENST00000619445 RPL39P62891 51 aaKnown RBP7.35□□□□□ -1.23
UPF3B-204ENST00000619445 LAMTOR2Q9Y2Q5 125 aa7.35□□□□□ -1.23
UPF3B-204ENST00000619445 PYGO1Q9Y3Y4 419 aa7.35□□□□□ -1.23
UPF3B-204ENST00000619445 A0A1B0GXF2 115 aa7.34□□□□□ -1.23
UPF3B-204ENST00000619445 TLX1NBP0CAT3 122 aa7.34□□□□□ -1.23
UPF3B-204ENST00000619445 MRPL54Q6P161 138 aaKnown RBP7.34□□□□□ -1.23
UPF3B-204ENST00000619445 PSORS1C2Q9UIG4 136 aa7.34□□□□□ -1.23
UPF3B-204ENST00000619445 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 A0A087WZ39 114 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 C9JQL5 133 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 NPYP01303 97 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 TMEM136Q6ZRR5 245 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 PRELID3AQ96N28 172 aa7.33□□□□□ -1.24
UPF3B-204ENST00000619445 OPRPNQ99935 248 aaPredicted RBP7.33□□□□□ -1.24
UPF3B-204ENST00000619445 TRBV30A0A0K0K1B3 111 aa7.32□□□□□ -1.24
UPF3B-204ENST00000619445 NPSP0C0P6 89 aa7.32□□□□□ -1.24
UPF3B-204ENST00000619445 TMEM141Q96I45 108 aa7.32□□□□□ -1.24
UPF3B-204ENST00000619445 C2orf88Q9BSF0 95 aa7.32□□□□□ -1.24
UPF3B-204ENST00000619445 LRP2P98164 4655 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 PRSS47A8MTI9 375 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 K7EMI3 77 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 PNRC1Q12796 327 aaPredicted RBP7.31□□□□□ -1.24
UPF3B-204ENST00000619445 Q6ZN92 141 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 TEX43Q6ZNM6 134 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
UPF3B-204ENST00000619445 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
UPF3B-204ENST00000619445 G0S2P27469 103 aa7.3□□□□□ -1.24
UPF3B-204ENST00000619445 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
UPF3B-204ENST00000619445 UNQ6190/PRO20217Q6UXQ8 127 aa7.3□□□□□ -1.24
UPF3B-204ENST00000619445 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
UPF3B-204ENST00000619445 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
UPF3B-204ENST00000619445 CYSLTR1Q9Y271 337 aa7.3□□□□□ -1.24
UPF3B-204ENST00000619445 IGLV4-3A0A075B6K6 122 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 ORMDL2Q53FV1 153 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 LINC00242Q5T6M2 205 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 C6orf48Q9UBA6 75 aa7.29□□□□□ -1.24
UPF3B-204ENST00000619445 MT-ND4LP03901 98 aa7.28□□□□□ -1.24
UPF3B-204ENST00000619445 SEC11AP67812 179 aa7.28□□□□□ -1.24
UPF3B-204ENST00000619445 ODF1Q14990 250 aa7.28□□□□□ -1.24
UPF3B-204ENST00000619445 IGLV1-50A0A075B6I6 118 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 H0Y9J4 135 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 PRSS2P07478 247 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 UBE2BP63146 152 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 KIAA0087Q14695 138 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 FAM19A5Q7Z5A7 132 aaPredicted RBP7.27□□□□□ -1.25
UPF3B-204ENST00000619445 Q8N8P6 123 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 VCX2Q9H322 139 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
UPF3B-204ENST00000619445 M0QXV9 152 aa7.26□□□□□ -1.25
UPF3B-204ENST00000619445 UBE2D1P51668 147 aa7.26□□□□□ -1.25
UPF3B-204ENST00000619445 C2orf66Q6UXQ4 117 aa7.26□□□□□ -1.25
UPF3B-204ENST00000619445 NXT2Q9NPJ8 142 aaKnown RBP7.26□□□□□ -1.25
UPF3B-204ENST00000619445 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
UPF3B-204ENST00000619445 RPL13AP40429 203 aaKnown RBP7.25□□□□□ -1.25
UPF3B-204ENST00000619445 CKS1BP61024 79 aa7.25□□□□□ -1.25
UPF3B-204ENST00000619445 AMELXQ99217 191 aa7.25□□□□□ -1.25
UPF3B-204ENST00000619445 LOC389332A0A1B0GUA5 103 aa7.24□□□□□ -1.25
UPF3B-204ENST00000619445 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
UPF3B-204ENST00000619445 RAB14P61106 215 aa7.24□□□□□ -1.25
UPF3B-204ENST00000619445 HERVK_113P63121 156 aa7.24□□□□□ -1.25
UPF3B-204ENST00000619445 FAM19A3Q7Z5A8 133 aa7.24□□□□□ -1.25
UPF3B-204ENST00000619445 A0A1B0GVG6 124 aa7.23□□□□□ -1.25
UPF3B-204ENST00000619445 LINC01549A6NIU2 74 aa7.23□□□□□ -1.25
UPF3B-204ENST00000619445 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
UPF3B-204ENST00000619445 Q8IZM0 81 aa7.23□□□□□ -1.25
UPF3B-204ENST00000619445 CXCL5P42830 114 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms