RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RMI2Q96E14 147 aa9.01□□□□□ -0.97
MATR3-227ENST00000618441 MUC4Q99102 2169 aa9.01□□□□□ -0.97
MATR3-227ENST00000618441 PSMB8P28062 276 aa9□□□□□ -0.97
MATR3-227ENST00000618441 RPL36AP83881 106 aaKnown RBP9□□□□□ -0.97
MATR3-227ENST00000618441 RPL36ALQ969Q0 106 aaKnown RBP9□□□□□ -0.97
MATR3-227ENST00000618441 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
MATR3-227ENST00000618441 PRB2P02812 416 aaPredicted RBP9□□□□□ -0.97
MATR3-227ENST00000618441 PROK1P58294 105 aa9□□□□□ -0.97
MATR3-227ENST00000618441 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
MATR3-227ENST00000618441 F8WEM9 126 aa9□□□□□ -0.97
MATR3-227ENST00000618441 IGSF10Q6WRI0 2623 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 UPK3BQ9BT76 320 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 IGHV1OR15-1A0A075B7D0 117 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 IGHV1-69P01742 117 aa8.99□□□□□ -0.97
MATR3-227ENST00000618441 LINC00158P58513 81 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 SERP1Q9Y6X1 66 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 HECTD1Q9ULT8 2610 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 A0A087WYN8 130 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 LRCOL1A6NCL2 159 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 ATP6V0E1O15342 81 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 ITPR1Q14643 2758 aa8.98□□□□□ -0.97
MATR3-227ENST00000618441 Q6JHZ5 121 aa8.97□□□□□ -0.97
MATR3-227ENST00000618441 DOPEY1Q5JWR5 2465 aa8.97□□□□□ -0.97
MATR3-227ENST00000618441 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
MATR3-227ENST00000618441 SMIM26A0A096LP01 95 aa8.97□□□□□ -0.97
MATR3-227ENST00000618441 ZNF843Q8N446 348 aa8.96□□□□□ -0.97
MATR3-227ENST00000618441 RNASE6Q93091 150 aaKnown RBP8.96□□□□□ -0.97
MATR3-227ENST00000618441 A0A0J9YX75 114 aa8.96□□□□□ -0.97
MATR3-227ENST00000618441 IGFL3Q6UXB1 125 aa8.96□□□□□ -0.97
MATR3-227ENST00000618441 GNLYP22749 145 aa8.96□□□□□ -0.98
MATR3-227ENST00000618441 LINC00315P59091 139 aa8.96□□□□□ -0.98
MATR3-227ENST00000618441 SPINK13Q1W4C9 94 aa8.96□□□□□ -0.98
MATR3-227ENST00000618441 USP24Q9UPU5 2620 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 M0QY20 66 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 IGHV4OR15-8A0A075B7B6 117 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 A0A087WW49 117 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 UNQ9165/PRO28630Q6UXU0 137 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 COL27A1Q8IZC6 1860 aaPredicted RBP8.95□□□□□ -0.98
MATR3-227ENST00000618441 PRM2P04554 102 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
MATR3-227ENST00000618441 IGHV7-81A0A0B4J1V7 117 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 BPESC1Q9GZL8 116 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 REG3AQ06141 175 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 SCXQ7RTU7 201 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
MATR3-227ENST00000618441 MIR7-3HGQ8N6C7 128 aa8.93□□□□□ -0.98
MATR3-227ENST00000618441 RNF5Q99942 180 aa8.93□□□□□ -0.98
MATR3-227ENST00000618441 ESM1Q9NQ30 184 aa8.93□□□□□ -0.98
MATR3-227ENST00000618441 KIF25-AS1Q9Y6Z4 181 aa8.93□□□□□ -0.98
MATR3-227ENST00000618441 TRBV7-6A0A0J9YX20 115 aa8.92□□□□□ -0.98
MATR3-227ENST00000618441 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
MATR3-227ENST00000618441 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
MATR3-227ENST00000618441 CHD6Q8TD26 2715 aa8.92□□□□□ -0.98
MATR3-227ENST00000618441 SND1-IT1Q9HBX3 110 aa8.92□□□□□ -0.98
MATR3-227ENST00000618441 LINC01600Q96MT4 127 aa8.91□□□□□ -0.98
MATR3-227ENST00000618441 BSNQ9UPA5 3926 aa8.91□□□□□ -0.98
MATR3-227ENST00000618441 COPS9Q8WXC6 57 aa8.91□□□□□ -0.98
MATR3-227ENST00000618441 A0A087WZ39 114 aa8.91□□□□□ -0.98
MATR3-227ENST00000618441 CELSR1Q9NYQ6 3014 aa8.91□□□□□ -0.98
MATR3-227ENST00000618441 AVPP01185 164 aa8.9□□□□□ -0.98
MATR3-227ENST00000618441 MRPS36P82909 103 aaKnown RBP8.9□□□□□ -0.98
MATR3-227ENST00000618441 FP248Q71RG6 208 aaPredicted RBP8.9□□□□□ -0.98
MATR3-227ENST00000618441 RHPN1-AS1Q9BWJ2 59 aa8.9□□□□□ -0.98
MATR3-227ENST00000618441 COX6A2Q02221 97 aa8.9□□□□□ -0.99
MATR3-227ENST00000618441 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.99
MATR3-227ENST00000618441 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.99
MATR3-227ENST00000618441 FAM222AQ5U5X8 452 aa8.89□□□□□ -0.99
MATR3-227ENST00000618441 ITLN2Q8WWU7 325 aaPredicted RBP8.89□□□□□ -0.99
MATR3-227ENST00000618441 CUBNO60494 3623 aa8.89□□□□□ -0.99
MATR3-227ENST00000618441 E7EQL1 145 aa8.89□□□□□ -0.99
MATR3-227ENST00000618441 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
MATR3-227ENST00000618441 TRAV13-2A0A0B4J235 113 aa8.89□□□□□ -0.99
MATR3-227ENST00000618441 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 H7BZZ5 65 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 NDUFA1O15239 70 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 Q6ZTI0 123 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 MAPK1IP1LQ8NDC0 245 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 ORMDL1Q9P0S3 153 aa8.88□□□□□ -0.99
MATR3-227ENST00000618441 LY6LH3BQJ8 138 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 LAMTOR3Q9UHA4 124 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 LYRM9A8MSI8 78 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 CCKP06307 115 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 LY6EQ16553 131 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
MATR3-227ENST00000618441 NPBQ8NG41 125 aa8.86□□□□□ -0.99
MATR3-227ENST00000618441 HELZ2Q9BYK8 2649 aaKnown RBP8.86□□□□□ -0.99
MATR3-227ENST00000618441 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
MATR3-227ENST00000618441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.86□□□□□ -0.99
MATR3-227ENST00000618441 TRAV10A0A0B4J240 114 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 TRBV6-5A0A0K0K1A5 114 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 IGHV3-53P01767 116 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 LYPD5Q6UWN5 251 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 CSMD2Q7Z408 3487 aa8.85□□□□□ -0.99
MATR3-227ENST00000618441 BLCAPP62952 87 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms