RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 WIPF1O43516 503 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 SMIM13P0DJ93 91 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 RBX1P62877 108 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 LCE2DQ5TA82 110 aaPredicted RBP2.39□□□□□ -2.03
LIG4-205ENST00000614526 MRPL52Q86TS9 123 aaKnown RBP2.39□□□□□ -2.03
LIG4-205ENST00000614526 NDUFA12Q9UI09 145 aa2.39□□□□□ -2.03
LIG4-205ENST00000614526 IGHV1-58A0A0C4DH39 117 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
LIG4-205ENST00000614526 SEC11AP67812 179 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 EGFEM1PQ0D2K5 195 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 LINC00269Q8N2A0 174 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 GTSF1LQ9H1H1 148 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 CCL25O15444 150 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 IGHV3-30P01768 117 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 IGHV3-33P01772 117 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 IGHV3-30-5P0DP03 117 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 ADAMTSL4-AS1Q5T5F5 129 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 Q9H8V8 135 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 STAB2Q8WWQ8 2551 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 A0A0J9YXY3 114 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 H3BRM9 83 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 K7EIL1 84 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 EIF4EBP3O60516 100 aaPredicted RBP2.38□□□□□ -2.03
LIG4-205ENST00000614526 HERVK_113P63121 156 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 MUSTN1Q8IVN3 82 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 MTURNQ8N3F0 131 aa2.38□□□□□ -2.03
LIG4-205ENST00000614526 CIDEAO60543 219 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 MRPL23Q16540 153 aaKnown RBP2.37□□□□□ -2.03
LIG4-205ENST00000614526 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
LIG4-205ENST00000614526 SAMD5Q5TGI4 173 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 LINC00526Q96FQ7 95 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 TM2D2Q9BX73 214 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 LINC00959A0A1B0GUT2 108 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 A4D1N5 150 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 SMIM1B2RUZ4 78 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 MEIG1Q5JSS6 88 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 C11orf45Q8TAV5 145 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 DEFB131BA0A096LNP1 70 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 LOC107984156A0A0G2JMH3 177 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 GAGE10A6NGK3 116 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 C9orf118A6NHY6 69 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 TIRAPP58753 221 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 LURAP1LQ8IV03 231 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 ARL17AQ8IVW1 177 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 PGPEP1Q9NXJ5 209 aa2.37□□□□□ -2.03
LIG4-205ENST00000614526 CSDC2Q9Y534 153 aaKnown RBP2.37□□□□□ -2.03
LIG4-205ENST00000614526 PFN2P35080 140 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 UBE2V1Q13404 147 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 C2orf82Q6UX34 121 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 WFDC10BQ8IUB3 73 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 IGLL5B9A064 214 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 CFC1BP0CG36 223 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 CFC1P0CG37 223 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 REG3AQ06141 175 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 SMAGPQ0VAQ4 97 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 LYPD5Q6UWN5 251 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 UBE2WQ96B02 151 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 SPCS1Q9Y6A9 102 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 TENM2Q9NT68 2774 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 COL7A1Q02388 2944 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 A0A1W2PPM0 123 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 SS18Q15532 418 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 TAL2Q16559 108 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 Q1RN00 199 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 C6orf226Q5I0X4 101 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
LIG4-205ENST00000614526 IGLV5-45A0A087WSX0 123 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 TMEM238C9JI98 176 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 FABP2P12104 132 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 ESRGQ1W209 222 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 CHCHD10Q8WYQ3 142 aaPredicted RBP2.35□□□□□ -2.03
LIG4-205ENST00000614526 LITAFQ99732 161 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 IGLV5-39A0A0G2JS06 123 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 H3BMG7 143 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 H7C423 109 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 LINC00158P58513 81 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 HUWE1Q7Z6Z7 4374 aaKnown RBP2.35□□□□□ -2.03
LIG4-205ENST00000614526 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 TMEM238LA0A1B0GVL6 79 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 A6NJY4 79 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 MALP21145 153 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 PSMB2P49721 201 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
LIG4-205ENST00000614526 LELP1Q5T871 98 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 KRTAP3-3Q9BYR6 98 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 KRTAP3-2Q9BYR7 98 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 Q9HAA7 133 aa2.35□□□□□ -2.03
LIG4-205ENST00000614526 DNHD1Q96M86 4753 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 A0A1B0GUV1 79 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 GAGE12HA6NDE8 117 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 NDUFA1O15239 70 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 TSPAN13O95857 204 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
LIG4-205ENST00000614526 C6orf223Q8N319 242 aa2.34□□□□□ -2.03
LIG4-205ENST00000614526 SPATA25Q9BR10 227 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms