RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
GEN1-208ENST00000614478 TSPEAR-AS2P59090 65 aa12.25□□□□□ -0.45
GEN1-208ENST00000614478 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
GEN1-208ENST00000614478 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
GEN1-208ENST00000614478 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
GEN1-208ENST00000614478 FXYD2P54710 66 aa12.25□□□□□ -0.45
GEN1-208ENST00000614478 HERVK_113P63121 156 aa12.25□□□□□ -0.45
GEN1-208ENST00000614478 IGLV4-60A0A075B6I1 120 aa12.24□□□□□ -0.45
GEN1-208ENST00000614478 SH2D6Q7Z4S9 175 aa12.24□□□□□ -0.45
GEN1-208ENST00000614478 TMEM262E9PQX1 116 aa12.23□□□□□ -0.45
GEN1-208ENST00000614478 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
GEN1-208ENST00000614478 PTTG1IPP53801 180 aa12.23□□□□□ -0.45
GEN1-208ENST00000614478 TRAV13-1A0A0B4J241 112 aa12.23□□□□□ -0.45
GEN1-208ENST00000614478 IGHV3-30-3P0DP02 117 aa12.23□□□□□ -0.45
GEN1-208ENST00000614478 C9orf118A6NHY6 69 aa12.22□□□□□ -0.45
GEN1-208ENST00000614478 H3BNG1 76 aa12.22□□□□□ -0.45
GEN1-208ENST00000614478 LINC00242Q5T6M2 205 aa12.21□□□□□ -0.45
GEN1-208ENST00000614478 Q6ZVH6 145 aa12.21□□□□□ -0.45
GEN1-208ENST00000614478 DEFB131BA0A096LNP1 70 aa12.21□□□□□ -0.46
GEN1-208ENST00000614478 COX6A2Q02221 97 aa12.21□□□□□ -0.46
GEN1-208ENST00000614478 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
GEN1-208ENST00000614478 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
GEN1-208ENST00000614478 RBX1P62877 108 aa12.2□□□□□ -0.46
GEN1-208ENST00000614478 SRSF9Q13242 221 aaKnown RBP eCLIP12.2□□□□□ -0.46
GEN1-208ENST00000614478 A0A1B0GWB2 263 aa12.19□□□□□ -0.46
GEN1-208ENST00000614478 LELP1Q5T871 98 aa12.19□□□□□ -0.46
GEN1-208ENST00000614478 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
GEN1-208ENST00000614478 IGKV3OR2-268A0A0C4DH90 116 aa12.18□□□□□ -0.46
GEN1-208ENST00000614478 UBE2V1Q13404 147 aa12.18□□□□□ -0.46
GEN1-208ENST00000614478 VAMP3Q15836 100 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 LYPD5Q6UWN5 251 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 TRAV8-3A0A0A6YYJ7 113 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 K7EP13 123 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 SPINK8P0C7L1 97 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 ZFAND6Q6FIF0 208 aa12.17□□□□□ -0.46
GEN1-208ENST00000614478 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
GEN1-208ENST00000614478 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
GEN1-208ENST00000614478 NDUFA12Q9UI09 145 aa12.15□□□□□ -0.46
GEN1-208ENST00000614478 A0A0J9YXY3 114 aa12.14□□□□□ -0.47
GEN1-208ENST00000614478 IGHV3-30P01768 117 aa12.14□□□□□ -0.47
GEN1-208ENST00000614478 IGHV3-30-5P0DP03 117 aa12.14□□□□□ -0.47
GEN1-208ENST00000614478 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
GEN1-208ENST00000614478 TRAV10A0A0B4J240 114 aa12.14□□□□□ -0.47
GEN1-208ENST00000614478 TIMM17BO60830 172 aa12.13□□□□□ -0.47
GEN1-208ENST00000614478 Q8N3U1 123 aa12.13□□□□□ -0.47
GEN1-208ENST00000614478 RAB37Q96AX2 223 aa12.13□□□□□ -0.47
GEN1-208ENST00000614478 LINC00959A0A1B0GUT2 108 aa12.12□□□□□ -0.47
GEN1-208ENST00000614478 H3BUT2 72 aa12.12□□□□□ -0.47
GEN1-208ENST00000614478 NDUFA1O15239 70 aa12.12□□□□□ -0.47
GEN1-208ENST00000614478 CCL25O15444 150 aa12.12□□□□□ -0.47
GEN1-208ENST00000614478 SMIM1B2RUZ4 78 aa12.11□□□□□ -0.47
GEN1-208ENST00000614478 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
GEN1-208ENST00000614478 A0A1W2PPM0 123 aa12.1□□□□□ -0.47
GEN1-208ENST00000614478 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
GEN1-208ENST00000614478 LINC00269Q8N2A0 174 aa12.1□□□□□ -0.47
GEN1-208ENST00000614478 SPANXDQ9BXN6 97 aa12.1□□□□□ -0.47
GEN1-208ENST00000614478 SPANXCQ9NY87 97 aa12.1□□□□□ -0.47
GEN1-208ENST00000614478 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
GEN1-208ENST00000614478 IGLL5B9A064 214 aa12.09□□□□□ -0.47
GEN1-208ENST00000614478 K7ERJ3 54 aa12.09□□□□□ -0.47
GEN1-208ENST00000614478 SS18Q15532 418 aa12.09□□□□□ -0.47
GEN1-208ENST00000614478 ESRGQ1W209 222 aa12.09□□□□□ -0.47
GEN1-208ENST00000614478 FABP2P12104 132 aa12.08□□□□□ -0.48
GEN1-208ENST00000614478 RPL24P83731 157 aaKnown RBP12.08□□□□□ -0.48
GEN1-208ENST00000614478 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
GEN1-208ENST00000614478 LITAFQ99732 161 aa12.08□□□□□ -0.48
GEN1-208ENST00000614478 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
GEN1-208ENST00000614478 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
GEN1-208ENST00000614478 REG3AQ06141 175 aa12.07□□□□□ -0.48
GEN1-208ENST00000614478 K7EP34 96 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 HERV-K104P63124 156 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 XCL1P47992 114 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 CIRBPQ14011 172 aaKnown RBP12.06□□□□□ -0.48
GEN1-208ENST00000614478 WFDC10BQ8IUB3 73 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 LINC01561Q8N1V8 128 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 C15orf53Q8NAA6 179 aa12.06□□□□□ -0.48
GEN1-208ENST00000614478 IFITM1P13164 125 aa12.05□□□□□ -0.48
GEN1-208ENST00000614478 DNAH7Q8WXX0 4024 aa12.05□□□□□ -0.48
GEN1-208ENST00000614478 A0A087WZ39 114 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.04□□□□□ -0.48
GEN1-208ENST00000614478 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 MIAQ16674 131 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 C5orf38Q86SI9 138 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 MUSTN1Q8IVN3 82 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 KLK12Q9UKR0 248 aa12.04□□□□□ -0.48
GEN1-208ENST00000614478 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
GEN1-208ENST00000614478 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
GEN1-208ENST00000614478 CFC1BP0CG36 223 aa12.03□□□□□ -0.48
GEN1-208ENST00000614478 CFC1P0CG37 223 aa12.03□□□□□ -0.48
GEN1-208ENST00000614478 NAA38Q9BRA0 125 aaKnown RBP12.03□□□□□ -0.48
GEN1-208ENST00000614478 Q9H8V8 135 aa12.03□□□□□ -0.48
GEN1-208ENST00000614478 SPCS1Q9Y6A9 102 aa12.03□□□□□ -0.48
GEN1-208ENST00000614478 IGLV10-54A0A075B6I4 117 aa12.02□□□□□ -0.49
GEN1-208ENST00000614478 A4D1N5 150 aa12.02□□□□□ -0.49
GEN1-208ENST00000614478 COPS9Q8WXC6 57 aa12.02□□□□□ -0.49
GEN1-208ENST00000614478 CHCHD10Q8WYQ3 142 aaPredicted RBP12.02□□□□□ -0.49
GEN1-208ENST00000614478 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
GEN1-208ENST00000614478 PRR34Q9NV39 138 aa12.02□□□□□ -0.49
GEN1-208ENST00000614478 APOMO95445 188 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms