RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
MDC1-209ENST00000613547 PMVKQ15126 192 aa8.67□□□□□ -1.02
MDC1-209ENST00000613547 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
MDC1-209ENST00000613547 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
MDC1-209ENST00000613547 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
MDC1-209ENST00000613547 PKD1P98161 4303 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 IGHV3OR16-9A0A0B4J2B5 98 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 SERF1AO75920 110 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 HERVK_113P63121 156 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 PDZD11Q5EBL8 140 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
MDC1-209ENST00000613547 NDUFA6P56556 154 aa8.65□□□□□ -1.02
MDC1-209ENST00000613547 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.02
MDC1-209ENST00000613547 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.02
MDC1-209ENST00000613547 A0A087WZ39 114 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BKO60814 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BJP06899 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BOP23527 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BBP33778 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BDP58876 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BCP62807 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST2H2BEQ16778 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.64□□□□□ -1.03
MDC1-209ENST00000613547 OR10D4PQ8NGN7 298 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BHQ93079 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BNQ99877 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 HIST1H2BMQ99879 126 aa8.64□□□□□ -1.03
MDC1-209ENST00000613547 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
MDC1-209ENST00000613547 COX6A2Q02221 97 aa8.63□□□□□ -1.03
MDC1-209ENST00000613547 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
MDC1-209ENST00000613547 FAM19A2Q8N3H0 131 aa8.63□□□□□ -1.03
MDC1-209ENST00000613547 ORAOV1Q8WV07 137 aa8.63□□□□□ -1.03
MDC1-209ENST00000613547 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 C9orf163Q8N9P6 203 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
MDC1-209ENST00000613547 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
MDC1-209ENST00000613547 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 LEPROTL1O95214 131 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 LINC00310P59036 64 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 LINC01620Q4KN68 170 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 IFI27L1Q96BM0 104 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
MDC1-209ENST00000613547 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 H3BRM9 83 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 SYCNQ0VAF6 134 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 CDKN2A-AS1Q9UH64 79 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 HSPB8Q9UJY1 196 aa8.6□□□□□ -1.03
MDC1-209ENST00000613547 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.03
MDC1-209ENST00000613547 F8WDY8 70 aa8.59□□□□□ -1.03
MDC1-209ENST00000613547 PRSS2P07478 247 aa8.59□□□□□ -1.03
MDC1-209ENST00000613547 LINC00526Q96FQ7 95 aa8.59□□□□□ -1.03
MDC1-209ENST00000613547 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
MDC1-209ENST00000613547 IGLV5-45A0A087WSX0 123 aa8.58□□□□□ -1.04
MDC1-209ENST00000613547 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
MDC1-209ENST00000613547 SLPIP03973 132 aa8.58□□□□□ -1.04
MDC1-209ENST00000613547 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
MDC1-209ENST00000613547 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
MDC1-209ENST00000613547 NDUFA1O15239 70 aa8.57□□□□□ -1.04
MDC1-209ENST00000613547 NUPR1O60356 82 aa8.57□□□□□ -1.04
MDC1-209ENST00000613547 FABP4P15090 132 aa8.57□□□□□ -1.04
MDC1-209ENST00000613547 TOMM7Q9P0U1 55 aa8.57□□□□□ -1.04
MDC1-209ENST00000613547 H0Y8G0 127 aa8.56□□□□□ -1.04
MDC1-209ENST00000613547 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
MDC1-209ENST00000613547 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
MDC1-209ENST00000613547 SDIM1Q6ZPB5 146 aa8.56□□□□□ -1.04
MDC1-209ENST00000613547 CKS1BP61024 79 aa8.55□□□□□ -1.04
MDC1-209ENST00000613547 Q6ZRU5 148 aa8.55□□□□□ -1.04
MDC1-209ENST00000613547 Q8IZM0 81 aa8.55□□□□□ -1.04
MDC1-209ENST00000613547 MAP1LC3CQ9BXW4 147 aa8.55□□□□□ -1.04
MDC1-209ENST00000613547 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
MDC1-209ENST00000613547 F8VRH5 84 aa8.54□□□□□ -1.04
MDC1-209ENST00000613547 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
MDC1-209ENST00000613547 KIAA0087Q14695 138 aa8.54□□□□□ -1.04
MDC1-209ENST00000613547 TMEM170BQ5T4T1 132 aa8.54□□□□□ -1.04
MDC1-209ENST00000613547 Q6ZSA8 131 aa8.54□□□□□ -1.04
MDC1-209ENST00000613547 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
MDC1-209ENST00000613547 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
MDC1-209ENST00000613547 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
MDC1-209ENST00000613547 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
MDC1-209ENST00000613547 CXCL5P42830 114 aa8.53□□□□□ -1.04
MDC1-209ENST00000613547 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
MDC1-209ENST00000613547 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
MDC1-209ENST00000613547 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 ODF1Q14990 250 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 DPH3Q96FX2 82 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 LINC00474Q9P2X8 69 aa8.52□□□□□ -1.05
MDC1-209ENST00000613547 TRBV30A0A0K0K1B3 111 aa8.51□□□□□ -1.05
MDC1-209ENST00000613547 PLNP26678 52 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms