RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 FLNAP21333 2647 aaKnown RBP10.12□□□□□ -0.79
MUC1-223ENST00000611571 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 ZNF702PQ9H963 129 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 ATMQ13315 3056 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 FAM222AQ5U5X8 452 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 REV3LO60673 3130 aa10.12□□□□□ -0.79
MUC1-223ENST00000611571 TRAV23DV6A0A075B6W5 121 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 SPANXCQ9NY87 97 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 J3QKU1 62 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 Q6ZSN1 163 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 COX8CQ7Z4L0 72 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 SPATA25Q9BR10 227 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 PRORYQ9H606 182 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 RBMY1FQ15415 496 aaKnown RBP10.11□□□□□ -0.79
MUC1-223ENST00000611571 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 Q9UF83 564 aa10.11□□□□□ -0.79
MUC1-223ENST00000611571 PRO0255Q9UI72 69 aa10.1□□□□□ -0.79
MUC1-223ENST00000611571 H7C423 109 aa10.1□□□□□ -0.79
MUC1-223ENST00000611571 hADV29S1A0JD25 119 aa10.1□□□□□ -0.79
MUC1-223ENST00000611571 CCDC179H3BU77 68 aa10.1□□□□□ -0.79
MUC1-223ENST00000611571 LINC00694P0DN24 101 aa10.09□□□□□ -0.79
MUC1-223ENST00000611571 LINC00643Q86TS7 51 aa10.09□□□□□ -0.79
MUC1-223ENST00000611571 NDUFA1O15239 70 aa10.09□□□□□ -0.79
MUC1-223ENST00000611571 PLA2G2AP14555 144 aa10.09□□□□□ -0.79
MUC1-223ENST00000611571 PYGO1Q9Y3Y4 419 aa10.09□□□□□ -0.79
MUC1-223ENST00000611571 SPART-AS1P0CW21 52 aa10.08□□□□□ -0.8
MUC1-223ENST00000611571 SPTBN5Q9NRC6 3674 aaKnown RBP10.08□□□□□ -0.8
MUC1-223ENST00000611571 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
MUC1-223ENST00000611571 ITPR3Q14573 2671 aa10.08□□□□□ -0.8
MUC1-223ENST00000611571 F8WEM9 126 aa10.08□□□□□ -0.8
MUC1-223ENST00000611571 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
MUC1-223ENST00000611571 COX6A2Q02221 97 aa10.08□□□□□ -0.8
MUC1-223ENST00000611571 LINC00242Q5T6M2 205 aa10.07□□□□□ -0.8
MUC1-223ENST00000611571 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
MUC1-223ENST00000611571 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
MUC1-223ENST00000611571 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
MUC1-223ENST00000611571 LST1O00453 97 aa10.06□□□□□ -0.8
MUC1-223ENST00000611571 ODF3L2Q3SX64 289 aa10.06□□□□□ -0.8
MUC1-223ENST00000611571 BBC3Q96PG8 261 aaPredicted RBP10.06□□□□□ -0.8
MUC1-223ENST00000611571 TIRAPP58753 221 aa10.06□□□□□ -0.8
MUC1-223ENST00000611571 COL4A2P08572 1712 aa10.05□□□□□ -0.8
MUC1-223ENST00000611571 UBE2D3P61077 147 aa10.05□□□□□ -0.8
MUC1-223ENST00000611571 UBE2D2P62837 147 aa10.05□□□□□ -0.8
MUC1-223ENST00000611571 ATOX1O00244 68 aa10.05□□□□□ -0.8
MUC1-223ENST00000611571 CHCHD10Q8WYQ3 142 aaPredicted RBP10.05□□□□□ -0.8
MUC1-223ENST00000611571 REG3AQ06141 175 aa10.04□□□□□ -0.8
MUC1-223ENST00000611571 C6orf99Q4VX62 202 aa10.04□□□□□ -0.8
MUC1-223ENST00000611571 USP34Q70CQ2 3546 aa10.04□□□□□ -0.8
MUC1-223ENST00000611571 PRR3P79522 188 aaKnown RBP10.04□□□□□ -0.8
MUC1-223ENST00000611571 LOC400499M0QZD8 3231 aa10.03□□□□□ -0.8
MUC1-223ENST00000611571 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
MUC1-223ENST00000611571 KIF25-AS1Q9Y6Z4 181 aa10.03□□□□□ -0.8
MUC1-223ENST00000611571 LINC01006Q8NI28 216 aa10.02□□□□□ -0.8
MUC1-223ENST00000611571 UBE2BP63146 152 aa10.02□□□□□ -0.81
MUC1-223ENST00000611571 C9orf66Q5T8R8 295 aa10.02□□□□□ -0.81
MUC1-223ENST00000611571 WFDC9Q8NEX5 89 aa10.02□□□□□ -0.81
MUC1-223ENST00000611571 SMIM11BQ8TCY0 68 aa10.02□□□□□ -0.81
MUC1-223ENST00000611571 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
MUC1-223ENST00000611571 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
MUC1-223ENST00000611571 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
MUC1-223ENST00000611571 SMCPP49901 116 aaPredicted RBP10□□□□□ -0.81
MUC1-223ENST00000611571 JMJD7-PLA2G4BH0Y9G9 81 aa10□□□□□ -0.81
MUC1-223ENST00000611571 LINC00315P59091 139 aa10□□□□□ -0.81
MUC1-223ENST00000611571 CCL18P55774 89 aa10□□□□□ -0.81
MUC1-223ENST00000611571 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
MUC1-223ENST00000611571 ENHOQ6UWT2 76 aa10□□□□□ -0.81
MUC1-223ENST00000611571 SPANXDQ9BXN6 97 aa10□□□□□ -0.81
MUC1-223ENST00000611571 IGLV4-60A0A075B6I1 120 aa10□□□□□ -0.81
MUC1-223ENST00000611571 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
MUC1-223ENST00000611571 SMR3AQ99954 134 aa10□□□□□ -0.81
MUC1-223ENST00000611571 COL12A1Q99715 3063 aa9.99□□□□□ -0.81
MUC1-223ENST00000611571 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
MUC1-223ENST00000611571 C1orf158Q8N1D5 194 aa9.99□□□□□ -0.81
MUC1-223ENST00000611571 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
MUC1-223ENST00000611571 ETDCA0A1B0GVM5 59 aa9.98□□□□□ -0.81
MUC1-223ENST00000611571 NREPQ16612 68 aa9.98□□□□□ -0.81
MUC1-223ENST00000611571 DIRC1Q969H9 104 aa9.98□□□□□ -0.81
MUC1-223ENST00000611571 TRBV6-4A0A1B0GX49 114 aa9.97□□□□□ -0.81
MUC1-223ENST00000611571 CDIP1Q9H305 208 aa9.97□□□□□ -0.81
MUC1-223ENST00000611571 ASH1LQ9NR48 2969 aaKnown RBP9.97□□□□□ -0.81
MUC1-223ENST00000611571 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
MUC1-223ENST00000611571 A0A087WVE0 104 aa9.97□□□□□ -0.81
MUC1-223ENST00000611571 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
MUC1-223ENST00000611571 LRBAP50851 2863 aa9.96□□□□□ -0.81
MUC1-223ENST00000611571 WDFY3Q8IZQ1 3526 aa9.96□□□□□ -0.82
MUC1-223ENST00000611571 INAFM1C9JVW0 142 aa9.96□□□□□ -0.82
MUC1-223ENST00000611571 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
MUC1-223ENST00000611571 AMELXQ99217 191 aa9.95□□□□□ -0.82
MUC1-223ENST00000611571 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
MUC1-223ENST00000611571 Q6ZQY7 126 aa9.95□□□□□ -0.82
MUC1-223ENST00000611571 GCN1Q92616 2671 aaKnown RBP9.94□□□□□ -0.82
MUC1-223ENST00000611571 CXCL5P42830 114 aa9.94□□□□□ -0.82
MUC1-223ENST00000611571 TIMM17BO60830 172 aa9.94□□□□□ -0.82
MUC1-223ENST00000611571 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
MUC1-223ENST00000611571 UQCRQO14949 82 aa9.93□□□□□ -0.82
MUC1-223ENST00000611571 A0A096LNI7 61 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms