RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 A0A096LNI7 61 aa8.69□□□□□ -1.02
MUC1-222ENST00000610468 APCSP02743 223 aa8.69□□□□□ -1.02
MUC1-222ENST00000610468 ZNF25P17030 456 aaPredicted RBP8.69□□□□□ -1.02
MUC1-222ENST00000610468 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
MUC1-222ENST00000610468 MRPL52Q86TS9 123 aaKnown RBP8.69□□□□□ -1.02
MUC1-222ENST00000610468 LAMTOR2Q9Y2Q5 125 aa8.69□□□□□ -1.02
MUC1-222ENST00000610468 RNASEKQ6P5S7 137 aaKnown RBP8.68□□□□□ -1.02
MUC1-222ENST00000610468 OR5A1Q8NGJ0 315 aa8.68□□□□□ -1.02
MUC1-222ENST00000610468 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
MUC1-222ENST00000610468 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
MUC1-222ENST00000610468 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
MUC1-222ENST00000610468 PKIGQ9Y2B9 76 aa8.67□□□□□ -1.02
MUC1-222ENST00000610468 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 TCAPO15273 167 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 XCL1P47992 114 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 SPINK6Q6UWN8 80 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 CDC42SE2Q9NRR3 84 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 UBE2D4Q9Y2X8 147 aa8.66□□□□□ -1.02
MUC1-222ENST00000610468 IGHV1-58A0A0C4DH39 117 aa8.65□□□□□ -1.02
MUC1-222ENST00000610468 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
MUC1-222ENST00000610468 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
MUC1-222ENST00000610468 Q8N8P6 123 aa8.65□□□□□ -1.02
MUC1-222ENST00000610468 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
MUC1-222ENST00000610468 CSDC2Q9Y534 153 aaKnown RBP8.65□□□□□ -1.02
MUC1-222ENST00000610468 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 CCL25O15444 150 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 TRGC2P03986 189 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
MUC1-222ENST00000610468 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.03
MUC1-222ENST00000610468 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 CARD19Q96LW7 228 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 TIMM21Q9BVV7 248 aa8.64□□□□□ -1.03
MUC1-222ENST00000610468 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
MUC1-222ENST00000610468 ODF1Q14990 250 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 COA6Q5JTJ3 125 aaKnown RBP8.63□□□□□ -1.03
MUC1-222ENST00000610468 CD164L2Q6UWJ8 174 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 TRAPPC1Q9Y5R8 145 aa8.63□□□□□ -1.03
MUC1-222ENST00000610468 LOC389332A0A1B0GUA5 103 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
MUC1-222ENST00000610468 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
MUC1-222ENST00000610468 FCER1GP30273 86 aa8.61□□□□□ -1.03
MUC1-222ENST00000610468 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
MUC1-222ENST00000610468 FABP9Q0Z7S8 132 aa8.61□□□□□ -1.03
MUC1-222ENST00000610468 Q6ZRP5 223 aa8.61□□□□□ -1.03
MUC1-222ENST00000610468 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
MUC1-222ENST00000610468 PTTG1IPP53801 180 aa8.6□□□□□ -1.03
MUC1-222ENST00000610468 SS18Q15532 418 aa8.6□□□□□ -1.03
MUC1-222ENST00000610468 Q6ZUT4 128 aa8.6□□□□□ -1.03
MUC1-222ENST00000610468 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
MUC1-222ENST00000610468 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
MUC1-222ENST00000610468 A0A096LNJ9 63 aa8.59□□□□□ -1.03
MUC1-222ENST00000610468 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
MUC1-222ENST00000610468 ZNF561-AS1K7EIQ3 104 aa8.59□□□□□ -1.03
MUC1-222ENST00000610468 K7EMI3 77 aa8.59□□□□□ -1.03
MUC1-222ENST00000610468 MRPS36P82909 103 aaKnown RBP8.59□□□□□ -1.03
MUC1-222ENST00000610468 C18orf32Q8TCD1 76 aa8.59□□□□□ -1.03
MUC1-222ENST00000610468 NXT2Q9NPJ8 142 aaKnown RBP8.59□□□□□ -1.03
MUC1-222ENST00000610468 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
MUC1-222ENST00000610468 LOC107984640A0A0U1RRK4 108 aa8.57□□□□□ -1.04
MUC1-222ENST00000610468 SNRPEP62304 92 aaKnown RBP8.57□□□□□ -1.04
MUC1-222ENST00000610468 RNASE13Q5GAN3 156 aaKnown RBP8.57□□□□□ -1.04
MUC1-222ENST00000610468 LINC00173Q6ZV60 143 aa8.57□□□□□ -1.04
MUC1-222ENST00000610468 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
MUC1-222ENST00000610468 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 COX7A2LO14548 114 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 S100A2P29034 98 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 PACRGQ96M98 296 aaPredicted RBP8.56□□□□□ -1.04
MUC1-222ENST00000610468 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
MUC1-222ENST00000610468 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 APOMO95445 188 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 SMIM6P0DI80 62 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 LINC00310P59036 64 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 AMELXQ99217 191 aa8.55□□□□□ -1.04
MUC1-222ENST00000610468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
MUC1-222ENST00000610468 MALP21145 153 aa8.54□□□□□ -1.04
MUC1-222ENST00000610468 NDUFA6P56556 154 aa8.54□□□□□ -1.04
MUC1-222ENST00000610468 GAGE2BQ13066 116 aa8.54□□□□□ -1.04
MUC1-222ENST00000610468 ZC2HC1BQ5TFG8 222 aa8.54□□□□□ -1.04
MUC1-222ENST00000610468 C2orf48Q96LS8 159 aa8.54□□□□□ -1.04
MUC1-222ENST00000610468 NPSP0C0P6 89 aa8.53□□□□□ -1.04
MUC1-222ENST00000610468 TMEM18Q96B42 140 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms