RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 LELP1Q5T871 98 aa13.19□□□□□ -0.3
TUBB4B-202ENST00000604929 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
TUBB4B-202ENST00000604929 H3BNG1 76 aa13.18□□□□□ -0.3
TUBB4B-202ENST00000604929 GCSHP23434 173 aa13.18□□□□□ -0.3
TUBB4B-202ENST00000604929 LINC00269Q8N2A0 174 aa13.18□□□□□ -0.3
TUBB4B-202ENST00000604929 HIST1H4GQ99525 98 aa13.17□□□□□ -0.3
TUBB4B-202ENST00000604929 LINC00959A0A1B0GUT2 108 aa13.17□□□□□ -0.3
TUBB4B-202ENST00000604929 ANGP03950 147 aaKnown RBP13.17□□□□□ -0.3
TUBB4B-202ENST00000604929 K7EP13 123 aa13.16□□□□□ -0.3
TUBB4B-202ENST00000604929 Q6ZVH6 145 aa13.15□□□□□ -0.3
TUBB4B-202ENST00000604929 ORAOV1Q8WV07 137 aa13.15□□□□□ -0.3
TUBB4B-202ENST00000604929 DNAH9Q9NYC9 4486 aa13.15□□□□□ -0.3
TUBB4B-202ENST00000604929 SMIM1B2RUZ4 78 aa13.14□□□□□ -0.31
TUBB4B-202ENST00000604929 XCL1P47992 114 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 ESRGQ1W209 222 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 FXYD2P54710 66 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 SRSF9Q13242 221 aaKnown RBP eCLIP13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 C5orf38Q86SI9 138 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 CEND1Q8N111 149 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
TUBB4B-202ENST00000604929 TRAV10A0A0B4J240 114 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 IGLV10-54A0A075B6I4 117 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 CCL25O15444 150 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 PTTG1IPP53801 180 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 REG3AQ06141 175 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 SS18Q15532 418 aa13.12□□□□□ -0.31
TUBB4B-202ENST00000604929 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
TUBB4B-202ENST00000604929 IGHV3-30P01768 117 aa13.11□□□□□ -0.31
TUBB4B-202ENST00000604929 IGHV3-33P01772 117 aa13.11□□□□□ -0.31
TUBB4B-202ENST00000604929 IGHV3-30-5P0DP03 117 aa13.11□□□□□ -0.31
TUBB4B-202ENST00000604929 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
TUBB4B-202ENST00000604929 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
TUBB4B-202ENST00000604929 KLK12Q9UKR0 248 aa13.1□□□□□ -0.31
TUBB4B-202ENST00000604929 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
TUBB4B-202ENST00000604929 A0A0J9YXY3 114 aa13.1□□□□□ -0.31
TUBB4B-202ENST00000604929 TAL2Q16559 108 aa13.09□□□□□ -0.31
TUBB4B-202ENST00000604929 ZFAND6Q6FIF0 208 aa13.09□□□□□ -0.31
TUBB4B-202ENST00000604929 TM2D2Q9BX73 214 aa13.09□□□□□ -0.31
TUBB4B-202ENST00000604929 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
TUBB4B-202ENST00000604929 TOMM7Q9P0U1 55 aa13.08□□□□□ -0.32
TUBB4B-202ENST00000604929 A6NDN8 102 aa13.07□□□□□ -0.32
TUBB4B-202ENST00000604929 IGLL5B9A064 214 aa13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 TAX1BP3O14907 124 aa13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 Q9H8V8 135 aa13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 A0A087WZ39 114 aa13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 CHCHD10Q8WYQ3 142 aaPredicted RBP13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 RAB37Q96AX2 223 aa13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 NHP2Q9NX24 153 aaKnown RBP13.06□□□□□ -0.32
TUBB4B-202ENST00000604929 K7ERJ3 54 aa13.04□□□□□ -0.32
TUBB4B-202ENST00000604929 ADAMTSL4-AS1Q5T5F5 129 aa13.04□□□□□ -0.32
TUBB4B-202ENST00000604929 NDUFA1O15239 70 aa13.03□□□□□ -0.32
TUBB4B-202ENST00000604929 ENHOQ6UWT2 76 aa13.03□□□□□ -0.32
TUBB4B-202ENST00000604929 SPANXB1Q9NS25 103 aaPredicted RBP13.03□□□□□ -0.32
TUBB4B-202ENST00000604929 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
TUBB4B-202ENST00000604929 UBE2WQ96B02 151 aa13.03□□□□□ -0.32
TUBB4B-202ENST00000604929 A0A0U1RRA0 63 aa13.02□□□□□ -0.33
TUBB4B-202ENST00000604929 CD164L2Q6UWJ8 174 aa13.02□□□□□ -0.33
TUBB4B-202ENST00000604929 PRSS2P07478 247 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 SMIM13P0DJ93 91 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 LITAFQ99732 161 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 COX11Q9Y6N1 276 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 TMEM238C9JI98 176 aa13.01□□□□□ -0.33
TUBB4B-202ENST00000604929 PRKDCP78527 4128 aaKnown RBP13□□□□□ -0.33
TUBB4B-202ENST00000604929 MEGF8Q7Z7M0 2845 aa13□□□□□ -0.33
TUBB4B-202ENST00000604929 MUSTN1Q8IVN3 82 aa13□□□□□ -0.33
TUBB4B-202ENST00000604929 DAND5Q8N907 189 aa13□□□□□ -0.33
TUBB4B-202ENST00000604929 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
TUBB4B-202ENST00000604929 NPC2P61916 151 aa13□□□□□ -0.33
TUBB4B-202ENST00000604929 CRPP02741 224 aa12.99□□□□□ -0.33
TUBB4B-202ENST00000604929 COX7A2LO14548 114 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 MALP21145 153 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 FOXI1Q12951 378 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 C6orf226Q5I0X4 101 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 LINC00588Q9Y4M8 146 aa12.98□□□□□ -0.33
TUBB4B-202ENST00000604929 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.33
TUBB4B-202ENST00000604929 APOMO95445 188 aa12.96□□□□□ -0.34
TUBB4B-202ENST00000604929 CIRBPQ14011 172 aaKnown RBP12.96□□□□□ -0.34
TUBB4B-202ENST00000604929 TMEM238LA0A1B0GVL6 79 aa12.95□□□□□ -0.34
TUBB4B-202ENST00000604929 A6NJY4 79 aa12.95□□□□□ -0.34
TUBB4B-202ENST00000604929 H3BUT2 72 aa12.95□□□□□ -0.34
TUBB4B-202ENST00000604929 NHLRC4P0CG21 123 aaPredicted RBP12.95□□□□□ -0.34
TUBB4B-202ENST00000604929 CCL18P55774 89 aa12.95□□□□□ -0.34
TUBB4B-202ENST00000604929 LYSTQ99698 3801 aa12.94□□□□□ -0.34
TUBB4B-202ENST00000604929 A4D1N5 150 aa12.94□□□□□ -0.34
TUBB4B-202ENST00000604929 LINC01556Q5JQF7 62 aa12.94□□□□□ -0.34
TUBB4B-202ENST00000604929 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 EIF4EBP3O60516 100 aaPredicted RBP12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 HERV-K104P63124 156 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 MIAQ16674 131 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 C2orf82Q6UX34 121 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 SPANXDQ9BXN6 97 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 SPANXCQ9NY87 97 aa12.93□□□□□ -0.34
TUBB4B-202ENST00000604929 TIMM17BO60830 172 aa12.92□□□□□ -0.34
TUBB4B-202ENST00000604929 CFC1BP0CG36 223 aa12.92□□□□□ -0.34
TUBB4B-202ENST00000604929 CFC1P0CG37 223 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms