RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 TMEM105Q8N8V8 129 aa5.09□□□□□ -1.6
TUBE1-207ENST00000604689 ZNF71Q9NQZ8 489 aaPredicted RBP5.09□□□□□ -1.6
TUBE1-207ENST00000604689 COL6A6A6NMZ7 2263 aa5.09□□□□□ -1.6
TUBE1-207ENST00000604689 FSHBP01225 129 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 Q6ZRP5 223 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV3-49A0A0A0MS15 119 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 RPL37AP8A6NKH3 93 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 UBL5Q9BZL1 73 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 LINC00846Q9NV44 126 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 U3KQK5 164 aa5.08□□□□□ -1.6
TUBE1-207ENST00000604689 PTPRQQ9UMZ3 2332 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 SRRM5B3KS81 715 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 ZNF575Q86XF7 245 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 CGB3P0DN86 165 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 CGB7P0DN87 165 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 CASC2Q6XLA1 102 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 NOTCH3Q9UM47 2321 aa5.07□□□□□ -1.6
TUBE1-207ENST00000604689 C3orf84H3BNL1 204 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 LMO4P61968 165 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 C14orf178Q8N769 122 aaPredicted RBP5.06□□□□□ -1.6
TUBE1-207ENST00000604689 TRBV30A0A0K0K1B3 111 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 A6NN06 94 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 IBA57-AS1B1ANH7 110 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 PRAC2D3DTV9 90 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 F8VRH5 84 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 SUMO4Q6EEV6 95 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 EP300Q09472 2414 aaPredicted RBP5.06□□□□□ -1.6
TUBE1-207ENST00000604689 IGKV1-17P01599 117 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 PROK1P58294 105 aa5.06□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV4-38-2P0DP08 117 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 LPAL2Q16609 132 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 TMEM254Q8TBM7 123 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV1-3A0A0C4DH29 117 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 A0A0J9YY99 117 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 C19orf84I3L1E1 186 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 Q1T7F1 81 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 DEFB121Q5J5C9 76 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 RPL39LQ96EH5 51 aaKnown RBP5.05□□□□□ -1.6
TUBE1-207ENST00000604689 IGLV2-23P01705 113 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 TSPEAR-AS2P59090 65 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 DEFB1P60022 68 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 MRGPRG-AS1Q2M3A8 158 aa5.05□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV1-18A0A0C4DH31 117 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV3-38A0A0C4DH36 116 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV3-30P01768 117 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV3-30-5P0DP03 117 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV1-69P01742 117 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
TUBE1-207ENST00000604689 GAFA1Q96PS6 74 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 I3L3M4 83 aa5.04□□□□□ -1.6
TUBE1-207ENST00000604689 IGLV2-18A0A075B6J9 118 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 IGKV3D-20A0A0C4DH25 116 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 LYPD2Q6UXB3 125 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 TMEM167AQ8TBQ9 72 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 TMEM263Q8WUH6 116 aaKnown RBP5.03□□□□□ -1.6
TUBE1-207ENST00000604689 SPTAN1Q13813 2472 aaKnown RBP5.03□□□□□ -1.6
TUBE1-207ENST00000604689 IGHV3OR16-9A0A0B4J2B5 98 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 K7EQG2 157 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 C9orf66Q5T8R8 295 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 C20orf203Q8NBC4 194 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 LINC00476Q8WZB0 136 aa5.03□□□□□ -1.6
TUBE1-207ENST00000604689 CREBBPQ92793 2442 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 COX7A1P24310 79 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 RPL39P62891 51 aaKnown RBP5.02□□□□□ -1.61
TUBE1-207ENST00000604689 ZNF833PQ6ZTB9 187 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 C18orf65Q6ZTR6 163 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 VMO1Q7Z5L0 202 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 C9orf106Q8NAJ2 232 aa5.02□□□□□ -1.61
TUBE1-207ENST00000604689 IGLV5-39A0A0G2JS06 123 aa5.01□□□□□ -1.61
TUBE1-207ENST00000604689 IGKV3-15P01624 115 aa5.01□□□□□ -1.61
TUBE1-207ENST00000604689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.01□□□□□ -1.61
TUBE1-207ENST00000604689 IGHV3OR16-12A0A075B7B8 117 aa5.01□□□□□ -1.61
TUBE1-207ENST00000604689 TRAV10A0A0B4J240 114 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 H3BRN7 92 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 NREPQ16612 68 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 C2orf66Q6UXQ4 117 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 ATRXP46100 2492 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 I3L2K1 104 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 C1orf64Q8NEQ6 169 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 PRRC2AP48634 2157 aaKnown RBP5□□□□□ -1.61
TUBE1-207ENST00000604689 CRYBG3Q68DQ2 2970 aa5□□□□□ -1.61
TUBE1-207ENST00000604689 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 K7EIM0 57 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 LHBP01229 141 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 Q8N814 137 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 ACACAQ13085 2346 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 LYNX1G3V0Z9 82 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 IGHV1-46P01743 117 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 LYNX1P0DP58 116 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 COX6B1P14854 86 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 LINC01547P58512 204 aaPredicted RBP4.99□□□□□ -1.61
TUBE1-207ENST00000604689 C10orf25Q5T742 122 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 LINC00574Q9H8X3 128 aa4.99□□□□□ -1.61
TUBE1-207ENST00000604689 SMAD5-AS1Q9Y6J3 95 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms