RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 H3BT86 120 aa7.99□□□□□ -1.13
ZNF558-207ENST00000601372 TRBV6-8A0A0A6YYG3 113 aa7.99□□□□□ -1.13
ZNF558-207ENST00000601372 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
ZNF558-207ENST00000601372 CITED1Q99966 193 aa7.98□□□□□ -1.13
ZNF558-207ENST00000601372 CHCHD10Q8WYQ3 142 aaPredicted RBP7.98□□□□□ -1.13
ZNF558-207ENST00000601372 SPTBN5Q9NRC6 3674 aaKnown RBP7.98□□□□□ -1.13
ZNF558-207ENST00000601372 LRCOL1A6NCL2 159 aa7.98□□□□□ -1.13
ZNF558-207ENST00000601372 ZFYVE26Q68DK2 2539 aa7.98□□□□□ -1.13
ZNF558-207ENST00000601372 UBE2D1P51668 147 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 COX6A2Q02221 97 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 Q6ZSN1 163 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 TRBV30A0A0K0K1B3 111 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 POM121L12Q8N7R1 296 aa7.97□□□□□ -1.13
ZNF558-207ENST00000601372 FASNP49327 2511 aaKnown RBP7.96□□□□□ -1.13
ZNF558-207ENST00000601372 SPANXDQ9BXN6 97 aa7.96□□□□□ -1.13
ZNF558-207ENST00000601372 SPANXCQ9NY87 97 aa7.96□□□□□ -1.13
ZNF558-207ENST00000601372 A0A1B0GX51 115 aa7.95□□□□□ -1.14
ZNF558-207ENST00000601372 FHL3Q13643 280 aa7.95□□□□□ -1.14
ZNF558-207ENST00000601372 LELP1Q5T871 98 aa7.95□□□□□ -1.14
ZNF558-207ENST00000601372 RBMY1FQ15415 496 aaKnown RBP7.95□□□□□ -1.14
ZNF558-207ENST00000601372 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
ZNF558-207ENST00000601372 CHCHD7Q9BUK0 85 aa7.94□□□□□ -1.14
ZNF558-207ENST00000601372 H7C423 109 aa7.94□□□□□ -1.14
ZNF558-207ENST00000601372 CXCL5P42830 114 aa7.94□□□□□ -1.14
ZNF558-207ENST00000601372 NDUFV3P56181 108 aaKnown RBP7.94□□□□□ -1.14
ZNF558-207ENST00000601372 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
ZNF558-207ENST00000601372 MRPS36P82909 103 aaKnown RBP7.93□□□□□ -1.14
ZNF558-207ENST00000601372 SMIM20Q8N5G0 67 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 XGP55808 180 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 SORL1Q92673 2214 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 LINC00694P0DN24 101 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 ADAMTSL4-AS1Q5T5F5 129 aa7.93□□□□□ -1.14
ZNF558-207ENST00000601372 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
ZNF558-207ENST00000601372 C1orf158Q8N1D5 194 aa7.92□□□□□ -1.14
ZNF558-207ENST00000601372 FSHBP01225 129 aa7.92□□□□□ -1.14
ZNF558-207ENST00000601372 SBSPONQ8IVN8 264 aa7.91□□□□□ -1.14
ZNF558-207ENST00000601372 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
ZNF558-207ENST00000601372 A0A087WZ39 114 aa7.9□□□□□ -1.14
ZNF558-207ENST00000601372 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
ZNF558-207ENST00000601372 ABCA12Q86UK0 2595 aa7.9□□□□□ -1.14
ZNF558-207ENST00000601372 LINC01546A6NGU7 62 aa7.9□□□□□ -1.14
ZNF558-207ENST00000601372 BEAN1Q3B7T3 259 aa7.9□□□□□ -1.15
ZNF558-207ENST00000601372 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.15
ZNF558-207ENST00000601372 DIRC1Q969H9 104 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 EPG5Q9HCE0 2579 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
ZNF558-207ENST00000601372 FAM19A5Q7Z5A7 132 aaPredicted RBP7.89□□□□□ -1.15
ZNF558-207ENST00000601372 CDC42SE2Q9NRR3 84 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 A0A096LNT2 108 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 USP34Q70CQ2 3546 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 SMIM11BQ8TCY0 68 aa7.89□□□□□ -1.15
ZNF558-207ENST00000601372 UBE2D3P61077 147 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 UBE2D2P62837 147 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 VCANP13611 3396 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 LST1O00453 97 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 C1orf134Q5TEV5 83 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 LINC00959A0A1B0GUT2 108 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 ATOX1O00244 68 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 B9D2Q9BPU9 175 aa7.88□□□□□ -1.15
ZNF558-207ENST00000601372 TLN2Q9Y4G6 2542 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 IBA57-AS1B1ANH7 110 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 TIMM17BO60830 172 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 LINC00643Q86TS7 51 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 XAGE1AQ9HD64 81 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 JMJD7-PLA2G4BH0Y9G9 81 aa7.87□□□□□ -1.15
ZNF558-207ENST00000601372 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 IGLV5-52A0A0A0MRZ9 124 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 CELA1Q9UNI1 258 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 TNRC18O15417 2968 aaPredicted RBP7.86□□□□□ -1.15
ZNF558-207ENST00000601372 SCXQ7RTU7 201 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 IGLV4-60A0A075B6I1 120 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 CCDC179H3BU77 68 aa7.86□□□□□ -1.15
ZNF558-207ENST00000601372 COX7BP24311 80 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 SYCNQ0VAF6 134 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 FHL2Q14192 279 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 FAM19A4Q96LR4 140 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 SMIM1B2RUZ4 78 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 AMELXQ99217 191 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 DOPEY1Q5JWR5 2465 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 SPATA3Q8NHX4 192 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 AGRNO00468 2067 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 UPK3BQ9BT76 320 aa7.85□□□□□ -1.15
ZNF558-207ENST00000601372 ENHOQ6UWT2 76 aa7.84□□□□□ -1.15
ZNF558-207ENST00000601372 WFDC9Q8NEX5 89 aa7.84□□□□□ -1.15
ZNF558-207ENST00000601372 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.15
ZNF558-207ENST00000601372 C9orf116Q5BN46 136 aaPredicted RBP7.84□□□□□ -1.16
ZNF558-207ENST00000601372 MDFIQ99750 246 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 LINC00315P59091 139 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 MYO15AQ9UKN7 3530 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 POLQO75417 2590 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 CELSR3Q9NYQ7 3312 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 A0A087WYN8 130 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 NREPQ16612 68 aa7.83□□□□□ -1.16
ZNF558-207ENST00000601372 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms