RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 XCL1P47992 114 aa15.26■□□□□ 0.03
IRF3-228ENST00000601291 ANKRD39Q53RE8 183 aa15.26■□□□□ 0.03
IRF3-228ENST00000601291 CHCHD10Q8WYQ3 142 aaPredicted RBP15.26■□□□□ 0.03
IRF3-228ENST00000601291 TRAV8-4A0A0B4J246 113 aa15.25■□□□□ 0.03
IRF3-228ENST00000601291 TMEM223A0PJW6 202 aa15.25■□□□□ 0.03
IRF3-228ENST00000601291 IGLV10-54A0A075B6I4 117 aa15.24■□□□□ 0.03
IRF3-228ENST00000601291 C3orf84H3BNL1 204 aa15.24■□□□□ 0.03
IRF3-228ENST00000601291 E9PLD3 99 aa15.23■□□□□ 0.03
IRF3-228ENST00000601291 CD164L2Q6UWJ8 174 aa15.23■□□□□ 0.03
IRF3-228ENST00000601291 IGHV3OR16-9A0A0B4J2B5 98 aa15.22■□□□□ 0.03
IRF3-228ENST00000601291 IBA57-AS1B1ANH7 110 aa15.22■□□□□ 0.03
IRF3-228ENST00000601291 NMUP48645 174 aa15.22■□□□□ 0.03
IRF3-228ENST00000601291 CASC10Q5T4H9 136 aa15.22■□□□□ 0.03
IRF3-228ENST00000601291 CSMD3Q7Z407 3707 aa15.2■□□□□ 0.02
IRF3-228ENST00000601291 TRAV8-3A0A0A6YYJ7 113 aa15.2■□□□□ 0.02
IRF3-228ENST00000601291 SPINK8P0C7L1 97 aa15.2■□□□□ 0.02
IRF3-228ENST00000601291 IGHV3-64A0A075B6Q5 118 aa15.19■□□□□ 0.02
IRF3-228ENST00000601291 A0A087WZ39 114 aa15.19■□□□□ 0.02
IRF3-228ENST00000601291 IGHV1-58A0A0C4DH39 117 aa15.19■□□□□ 0.02
IRF3-228ENST00000601291 TSTD3H0UI37 97 aa15.19■□□□□ 0.02
IRF3-228ENST00000601291 C1orf43Q9BWL3 253 aa15.19■□□□□ 0.02
IRF3-228ENST00000601291 IGKV2D-26A0A0A0MRZ7 120 aa15.18■□□□□ 0.02
IRF3-228ENST00000601291 GAGE12HA6NDE8 117 aa15.18■□□□□ 0.02
IRF3-228ENST00000601291 COX7A2LO14548 114 aa15.18■□□□□ 0.02
IRF3-228ENST00000601291 C5orf38Q86SI9 138 aa15.18■□□□□ 0.02
IRF3-228ENST00000601291 PRO1933Q9H354 126 aa15.18■□□□□ 0.02
IRF3-228ENST00000601291 SMIM1B2RUZ4 78 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 LEPROTO15243 131 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 TTC32Q5I0X7 151 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 PLEKHB2Q96CS7 222 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 Q9HAA7 133 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 STARD9Q9P2P6 4700 aa15.17■□□□□ 0.02
IRF3-228ENST00000601291 FOXI1Q12951 378 aa15.16■□□□□ 0.02
IRF3-228ENST00000601291 RMI2Q96E14 147 aa15.16■□□□□ 0.02
IRF3-228ENST00000601291 C14orf144Q96I85 54 aa15.16■□□□□ 0.02
IRF3-228ENST00000601291 TGP01266 2768 aa15.16■□□□□ 0.02
IRF3-228ENST00000601291 IGKV2D-24A0A075B6R9 120 aa15.15■□□□□ 0.02
IRF3-228ENST00000601291 LINC01561Q8N1V8 128 aa15.15■□□□□ 0.02
IRF3-228ENST00000601291 COX8AP10176 69 aa15.15■□□□□ 0.02
IRF3-228ENST00000601291 MALP21145 153 aa15.15■□□□□ 0.02
IRF3-228ENST00000601291 IGLV5-39A0A0G2JS06 123 aa15.14■□□□□ 0.01
IRF3-228ENST00000601291 J3QQQ9 107 aa15.14■□□□□ 0.01
IRF3-228ENST00000601291 LGALS3P17931 250 aaKnown RBP15.14■□□□□ 0.01
IRF3-228ENST00000601291 PLECQ15149 4684 aaKnown RBP15.13■□□□□ 0.01
IRF3-228ENST00000601291 SLC25A34Q6PIV7 304 aa15.12■□□□□ 0.01
IRF3-228ENST00000601291 PCP2Q8IVA1 136 aa15.12■□□□□ 0.01
IRF3-228ENST00000601291 UQCR10Q9UDW1 63 aa15.12■□□□□ 0.01
IRF3-228ENST00000601291 NBDYA0A0U1RRE5 68 aa15.11■□□□□ 0.01
IRF3-228ENST00000601291 APOMO95445 188 aa15.11■□□□□ 0.01
IRF3-228ENST00000601291 TSPEAR-AS2P59090 65 aa15.11■□□□□ 0.01
IRF3-228ENST00000601291 KRTAP1-5Q9BYS1 174 aa15.11■□□□□ 0.01
IRF3-228ENST00000601291 KRTAP26-1Q6PEX3 210 aa15.1■□□□□ 0.01
IRF3-228ENST00000601291 BOD1L2Q8IYS8 172 aa15.1■□□□□ 0.01
IRF3-228ENST00000601291 MIEN1Q9BRT3 115 aa15.09■□□□□ 0.01
IRF3-228ENST00000601291 TTTY13Q9BZ97 58 aa15.09■□□□□ 0.01
IRF3-228ENST00000601291 COX11Q9Y6N1 276 aa15.09■□□□□ 0.01
IRF3-228ENST00000601291 DLEU1O43261 78 aa15.08■□□□□ 0
IRF3-228ENST00000601291 MYMXA0A1B0GTQ4 84 aa15.07■□□□□ 0
IRF3-228ENST00000601291 ZNF815PA8K554 130 aa15.07■□□□□ 0
IRF3-228ENST00000601291 LY6G6CO95867 125 aa15.07■□□□□ 0
IRF3-228ENST00000601291 COX7B2Q8TF08 81 aa15.07■□□□□ 0
IRF3-228ENST00000601291 TOMM7Q9P0U1 55 aa15.07■□□□□ 0
IRF3-228ENST00000601291 ORAOV1Q8WV07 137 aa15.07■□□□□ 0
IRF3-228ENST00000601291 LINC00476Q8WZB0 136 aa15.07■□□□□ 0
IRF3-228ENST00000601291 TM2D2Q9BX73 214 aa15.07■□□□□ 0
IRF3-228ENST00000601291 PRSS2P07478 247 aa15.06■□□□□ 0
IRF3-228ENST00000601291 MAPKAPK5-AS1Q8N8E1 139 aa15.06■□□□□ 0
IRF3-228ENST00000601291 NDUFA12Q9UI09 145 aa15.05■□□□□ -0
IRF3-228ENST00000601291 Q8IZM0 81 aa15.04■□□□□ -0
IRF3-228ENST00000601291 TP73-AS1Q9UF72 201 aa15.04■□□□□ -0
IRF3-228ENST00000601291 TENM2Q9NT68 2774 aa15.03■□□□□ -0
IRF3-228ENST00000601291 C6orf226Q5I0X4 101 aa15.02■□□□□ -0
IRF3-228ENST00000601291 CFAP161Q6P656 301 aa15.02■□□□□ -0
IRF3-228ENST00000601291 PCP4L1A6NKN8 68 aa15.02□□□□□ -0.01
IRF3-228ENST00000601291 NDUFA1O15239 70 aa15.02□□□□□ -0.01
IRF3-228ENST00000601291 HNRNPA3P51991 378 aaKnown RBP15.02□□□□□ -0.01
IRF3-228ENST00000601291 SPAG11BQ08648 103 aa15.01□□□□□ -0.01
IRF3-228ENST00000601291 SFTA2Q6UW10 78 aa15.01□□□□□ -0.01
IRF3-228ENST00000601291 SCGB1D4Q6XE38 83 aa15.01□□□□□ -0.01
IRF3-228ENST00000601291 LYSTQ99698 3801 aa15.01□□□□□ -0.01
IRF3-228ENST00000601291 DDTP30046 118 aa15□□□□□ -0.01
IRF3-228ENST00000601291 M0R2N4 97 aa14.99□□□□□ -0.01
IRF3-228ENST00000601291 PSCAO43653 123 aa14.99□□□□□ -0.01
IRF3-228ENST00000601291 CXCL5P42830 114 aa14.98□□□□□ -0.01
IRF3-228ENST00000601291 CKS1BP61024 79 aa14.98□□□□□ -0.01
IRF3-228ENST00000601291 HERV-K104P63124 156 aa14.98□□□□□ -0.01
IRF3-228ENST00000601291 ZNF625Q96I27 306 aaPredicted RBP14.98□□□□□ -0.01
IRF3-228ENST00000601291 DNAH1Q9P2D7 4330 aa14.97□□□□□ -0.01
IRF3-228ENST00000601291 ZNF561-AS1K7EIQ3 104 aa14.97□□□□□ -0.01
IRF3-228ENST00000601291 KIAA0087Q14695 138 aa14.97□□□□□ -0.01
IRF3-228ENST00000601291 C15orf56Q8N910 161 aa14.97□□□□□ -0.01
IRF3-228ENST00000601291 Q6ZR54 194 aa14.96□□□□□ -0.01
IRF3-228ENST00000601291 C2orf91Q6ZV80 131 aa14.96□□□□□ -0.01
IRF3-228ENST00000601291 VPS13DQ5THJ4 4388 aa14.96□□□□□ -0.01
IRF3-228ENST00000601291 A0A0J9YXY3 114 aa14.95□□□□□ -0.02
IRF3-228ENST00000601291 HIGD1BQ9P298 99 aa14.95□□□□□ -0.02
IRF3-228ENST00000601291 HIGD2BQ4VC39 106 aa14.94□□□□□ -0.02
IRF3-228ENST00000601291 GVQW2A0A096LPI5 108 aaPredicted RBP14.94□□□□□ -0.02
IRF3-228ENST00000601291 USP17L23D6RBM5 183 aa14.94□□□□□ -0.02
IRF3-228ENST00000601291 C2orf82Q6UX34 121 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 429.2 ms