RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 RMI2Q96E14 147 aa10.43□□□□□ -0.74
UPF1-206ENST00000598471 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
UPF1-206ENST00000598471 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
UPF1-206ENST00000598471 IGLV5-45A0A087WSX0 123 aa10.42□□□□□ -0.74
UPF1-206ENST00000598471 CSMD3Q7Z407 3707 aa10.42□□□□□ -0.74
UPF1-206ENST00000598471 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
UPF1-206ENST00000598471 C12orf57Q99622 126 aa10.41□□□□□ -0.74
UPF1-206ENST00000598471 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
UPF1-206ENST00000598471 hDV102S1A0JD36 115 aa10.4□□□□□ -0.74
UPF1-206ENST00000598471 COX6A2Q02221 97 aa10.4□□□□□ -0.74
UPF1-206ENST00000598471 Q9HAA7 133 aa10.4□□□□□ -0.74
UPF1-206ENST00000598471 CDKN2A-AS1Q9UH64 79 aa10.4□□□□□ -0.74
UPF1-206ENST00000598471 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 NBDYA0A0U1RRE5 68 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 LINC00518Q8N0U6 118 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 STPG4Q8N801 248 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 PAM16Q9Y3D7 125 aa10.39□□□□□ -0.75
UPF1-206ENST00000598471 KMT2CQ8NEZ4 4911 aaKnown RBP10.38□□□□□ -0.75
UPF1-206ENST00000598471 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 COX7A2LO14548 114 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 LY6G6CO95867 125 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 LINC01561Q8N1V8 128 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 LINC00476Q8WZB0 136 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 COX11Q9Y6N1 276 aa10.38□□□□□ -0.75
UPF1-206ENST00000598471 A0A087WZ39 114 aa10.37□□□□□ -0.75
UPF1-206ENST00000598471 MAJINQ3KP22 176 aa10.37□□□□□ -0.75
UPF1-206ENST00000598471 SPATA45Q537H7 98 aa10.37□□□□□ -0.75
UPF1-206ENST00000598471 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
UPF1-206ENST00000598471 E9PLD3 99 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 MALP21145 153 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 FOXI1Q12951 378 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 TM2D2Q9BX73 214 aa10.36□□□□□ -0.75
UPF1-206ENST00000598471 APOMO95445 188 aa10.35□□□□□ -0.75
UPF1-206ENST00000598471 ANKRD39Q53RE8 183 aa10.35□□□□□ -0.75
UPF1-206ENST00000598471 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
UPF1-206ENST00000598471 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 SMIM1B2RUZ4 78 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 LEPROTO15243 131 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 NMUP48645 174 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 KRTAP1-5Q9BYS1 174 aa10.34□□□□□ -0.75
UPF1-206ENST00000598471 IGHV3-64A0A075B6Q5 118 aa10.33□□□□□ -0.76
UPF1-206ENST00000598471 IGLV5-39A0A0G2JS06 123 aa10.32□□□□□ -0.76
UPF1-206ENST00000598471 LGALS3P17931 250 aaKnown RBP10.32□□□□□ -0.76
UPF1-206ENST00000598471 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
UPF1-206ENST00000598471 HYDINQ4G0P3 5121 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 LCE6AA0A183 80 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 J3QQQ9 107 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 PRSS2P07478 247 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 CFAP161Q6P656 301 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 RYR2Q92736 4967 aa10.31□□□□□ -0.76
UPF1-206ENST00000598471 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 M0R2N4 97 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 PSCAO43653 123 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 ORAOV1Q8WV07 137 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 RYR3Q15413 4870 aa10.3□□□□□ -0.76
UPF1-206ENST00000598471 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
UPF1-206ENST00000598471 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
UPF1-206ENST00000598471 ALMS1Q8TCU4 4167 aa10.29□□□□□ -0.76
UPF1-206ENST00000598471 TSTD3H0UI37 97 aa10.28□□□□□ -0.76
UPF1-206ENST00000598471 COX8AP10176 69 aa10.28□□□□□ -0.76
UPF1-206ENST00000598471 Q6ZR54 194 aa10.28□□□□□ -0.76
UPF1-206ENST00000598471 Q8IZM0 81 aa10.28□□□□□ -0.76
UPF1-206ENST00000598471 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
UPF1-206ENST00000598471 SLC25A34Q6PIV7 304 aa10.27□□□□□ -0.77
UPF1-206ENST00000598471 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
UPF1-206ENST00000598471 C14orf144Q96I85 54 aa10.27□□□□□ -0.77
UPF1-206ENST00000598471 LYSTQ99698 3801 aa10.27□□□□□ -0.77
UPF1-206ENST00000598471 ZNF815PA8K554 130 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 DLEU1O43261 78 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 CXCL5P42830 114 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 TSPEAR-AS2P59090 65 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 C6orf223Q8N319 242 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 PRO1933Q9H354 126 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
UPF1-206ENST00000598471 MYMXA0A1B0GTQ4 84 aa10.25□□□□□ -0.77
UPF1-206ENST00000598471 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
UPF1-206ENST00000598471 NDUFA1O15239 70 aa10.24□□□□□ -0.77
UPF1-206ENST00000598471 CKS1BP61024 79 aa10.24□□□□□ -0.77
UPF1-206ENST00000598471 BOD1L2Q8IYS8 172 aa10.24□□□□□ -0.77
UPF1-206ENST00000598471 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
UPF1-206ENST00000598471 USP17L23D6RBM5 183 aa10.23□□□□□ -0.77
UPF1-206ENST00000598471 HERV-K104P63124 156 aa10.23□□□□□ -0.77
UPF1-206ENST00000598471 C1orf134Q5TEV5 83 aa10.23□□□□□ -0.77
UPF1-206ENST00000598471 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
UPF1-206ENST00000598471 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
UPF1-206ENST00000598471 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
UPF1-206ENST00000598471 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
UPF1-206ENST00000598471 SCGB1D4Q6XE38 83 aa10.22□□□□□ -0.77
UPF1-206ENST00000598471 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms