RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SMIM1B2RUZ4 78 aa16.01■□□□□ 0.15
SRRM1-222ENST00000596378 Q9H8V8 135 aa16.01■□□□□ 0.15
SRRM1-222ENST00000596378 FAM19A3Q7Z5A8 133 aa16■□□□□ 0.15
SRRM1-222ENST00000596378 TRBV20-1A0A075B6N2 111 aa16■□□□□ 0.15
SRRM1-222ENST00000596378 A0A0U1RRA0 63 aa16■□□□□ 0.15
SRRM1-222ENST00000596378 GAGE6Q13070 117 aa16■□□□□ 0.15
SRRM1-222ENST00000596378 IGKV3OR2-268A0A0C4DH90 116 aa15.97■□□□□ 0.15
SRRM1-222ENST00000596378 F5H768 121 aa15.97■□□□□ 0.15
SRRM1-222ENST00000596378 CIDEAO60543 219 aa15.95■□□□□ 0.14
SRRM1-222ENST00000596378 TIMM17BO60830 172 aa15.95■□□□□ 0.14
SRRM1-222ENST00000596378 IGLV4-60A0A075B6I1 120 aa15.95■□□□□ 0.14
SRRM1-222ENST00000596378 TRIAP1O43715 76 aa15.95■□□□□ 0.14
SRRM1-222ENST00000596378 J3QR89 54 aa15.94■□□□□ 0.14
SRRM1-222ENST00000596378 SMAGPQ0VAQ4 97 aa15.94■□□□□ 0.14
SRRM1-222ENST00000596378 X6R8D5 127 aa15.94■□□□□ 0.14
SRRM1-222ENST00000596378 TRBV6-8A0A0A6YYG3 113 aa15.94■□□□□ 0.14
SRRM1-222ENST00000596378 HIVEP1P15822 2718 aa15.93■□□□□ 0.14
SRRM1-222ENST00000596378 FOXI1Q12951 378 aa15.93■□□□□ 0.14
SRRM1-222ENST00000596378 CHCHD5Q9BSY4 110 aa15.93■□□□□ 0.14
SRRM1-222ENST00000596378 C9JAW5 83 aa15.91■□□□□ 0.14
SRRM1-222ENST00000596378 PRIMA1Q86XR5 153 aa15.91■□□□□ 0.14
SRRM1-222ENST00000596378 TRRAPQ9Y4A5 3859 aa15.91■□□□□ 0.14
SRRM1-222ENST00000596378 CIRBPQ14011 172 aaKnown RBP15.91■□□□□ 0.14
SRRM1-222ENST00000596378 KIR2DL5BQ8NHK3 375 aa15.91■□□□□ 0.14
SRRM1-222ENST00000596378 ICOSQ9Y6W8 199 aa15.9■□□□□ 0.14
SRRM1-222ENST00000596378 H7C423 109 aa15.9■□□□□ 0.14
SRRM1-222ENST00000596378 ATP6V0E2Q8NHE4 81 aa15.9■□□□□ 0.14
SRRM1-222ENST00000596378 LINC00308Q8TCZ7 52 aa15.9■□□□□ 0.14
SRRM1-222ENST00000596378 TRBV30A0A0K0K1B3 111 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 GAGE12HA6NDE8 117 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 IFITM1P13164 125 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 CARD19Q96LW7 228 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 ATRQ13535 2644 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 DEFB4AO15263 64 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 MEIG1Q5JSS6 88 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 LINC00612Q8N6U2 182 aa15.89■□□□□ 0.13
SRRM1-222ENST00000596378 SLC25A20O43772 301 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 GYPEP15421 78 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 SOSTDC1Q6X4U4 206 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 TEN1Q86WV5 123 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 ANKRD29Q8N6D5 301 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 RPL13AP40429 203 aaKnown RBP15.88■□□□□ 0.13
SRRM1-222ENST00000596378 C9orf66Q5T8R8 295 aa15.88■□□□□ 0.13
SRRM1-222ENST00000596378 A0A096LPF7 62 aa15.86■□□□□ 0.13
SRRM1-222ENST00000596378 DEFB135Q30KP9 77 aa15.86■□□□□ 0.13
SRRM1-222ENST00000596378 ATXN8Q156A1 80 aa15.86■□□□□ 0.13
SRRM1-222ENST00000596378 FAM222AQ5U5X8 452 aa15.85■□□□□ 0.13
SRRM1-222ENST00000596378 RNF183Q96D59 192 aa15.85■□□□□ 0.13
SRRM1-222ENST00000596378 TOMM7Q9P0U1 55 aa15.84■□□□□ 0.13
SRRM1-222ENST00000596378 TEP1Q99973 2627 aaKnown RBP15.84■□□□□ 0.13
SRRM1-222ENST00000596378 LINC01620Q4KN68 170 aa15.84■□□□□ 0.13
SRRM1-222ENST00000596378 SPATA25Q9BR10 227 aa15.84■□□□□ 0.13
SRRM1-222ENST00000596378 PPDPFLQ8WWR9 84 aa15.83■□□□□ 0.12
SRRM1-222ENST00000596378 CLEC2BQ92478 149 aa15.83■□□□□ 0.12
SRRM1-222ENST00000596378 COX7B2Q8TF08 81 aa15.81■□□□□ 0.12
SRRM1-222ENST00000596378 SMIM9A6NGZ8 99 aa15.8■□□□□ 0.12
SRRM1-222ENST00000596378 IGHV3OR16-9A0A0B4J2B5 98 aa15.8■□□□□ 0.12
SRRM1-222ENST00000596378 SIGMAR1Q99720 223 aa15.8■□□□□ 0.12
SRRM1-222ENST00000596378 TMEM262E9PQX1 116 aa15.79■□□□□ 0.12
SRRM1-222ENST00000596378 HERV-K104P63124 156 aa15.79■□□□□ 0.12
SRRM1-222ENST00000596378 C5orf38Q86SI9 138 aa15.79■□□□□ 0.12
SRRM1-222ENST00000596378 PRO0255Q9UI72 69 aa15.79■□□□□ 0.12
SRRM1-222ENST00000596378 COX6CP09669 75 aa15.78■□□□□ 0.12
SRRM1-222ENST00000596378 CLPSL2Q6UWE3 100 aa15.78■□□□□ 0.12
SRRM1-222ENST00000596378 CITED1Q99966 193 aa15.78■□□□□ 0.12
SRRM1-222ENST00000596378 LINC00959A0A1B0GUT2 108 aa15.77■□□□□ 0.11
SRRM1-222ENST00000596378 IGHV4-28A0A0C4DH34 117 aa15.76■□□□□ 0.11
SRRM1-222ENST00000596378 CDIP1Q9H305 208 aa15.76■□□□□ 0.11
SRRM1-222ENST00000596378 PAX4O43316 350 aa15.76■□□□□ 0.11
SRRM1-222ENST00000596378 NTN5Q8WTR8 489 aaPredicted RBP15.75■□□□□ 0.11
SRRM1-222ENST00000596378 TRBV10-2A0A0K0K1G8 114 aa15.74■□□□□ 0.11
SRRM1-222ENST00000596378 LYRM9A8MSI8 78 aa15.74■□□□□ 0.11
SRRM1-222ENST00000596378 A0A087WZ39 114 aa15.73■□□□□ 0.11
SRRM1-222ENST00000596378 XCL1P47992 114 aa15.73■□□□□ 0.11
SRRM1-222ENST00000596378 MIR7-3HGQ8N6C7 128 aa15.73■□□□□ 0.11
SRRM1-222ENST00000596378 CELA1Q9UNI1 258 aa15.73■□□□□ 0.11
SRRM1-222ENST00000596378 APOC4P55056 127 aa15.73■□□□□ 0.11
SRRM1-222ENST00000596378 C11orf68Q9H3H3 251 aaKnown RBP15.73■□□□□ 0.11
SRRM1-222ENST00000596378 M0QXV9 152 aa15.72■□□□□ 0.11
SRRM1-222ENST00000596378 LST1O00453 97 aa15.72■□□□□ 0.11
SRRM1-222ENST00000596378 COPS9Q8WXC6 57 aa15.72■□□□□ 0.11
SRRM1-222ENST00000596378 Q8N3U1 123 aa15.71■□□□□ 0.11
SRRM1-222ENST00000596378 TEX49A0A1B0GTD5 131 aa15.7■□□□□ 0.1
SRRM1-222ENST00000596378 DAD1P61803 113 aa15.69■□□□□ 0.1
SRRM1-222ENST00000596378 C2orf82Q6UX34 121 aa15.69■□□□□ 0.1
SRRM1-222ENST00000596378 LINC00158P58513 81 aa15.69■□□□□ 0.1
SRRM1-222ENST00000596378 A0A1B0GUV1 79 aa15.68■□□□□ 0.1
SRRM1-222ENST00000596378 Q8NAQ8 132 aa15.68■□□□□ 0.1
SRRM1-222ENST00000596378 PFN2P35080 140 aa15.67■□□□□ 0.1
SRRM1-222ENST00000596378 SHISA2Q6UWI4 295 aa15.67■□□□□ 0.1
SRRM1-222ENST00000596378 TRAV26-1A0A087WT03 109 aa15.67■□□□□ 0.1
SRRM1-222ENST00000596378 SS18Q15532 418 aa15.66■□□□□ 0.1
SRRM1-222ENST00000596378 IGHV4-30-4P0DP06 118 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 HTN3P15516 51 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 LINC00269Q8N2A0 174 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 LINC01600Q96MT4 127 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 XGP55808 180 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 SND1-IT1Q9HBX3 110 aa15.65■□□□□ 0.1
SRRM1-222ENST00000596378 COX7A2LO14548 114 aa15.64■□□□□ 0.09
SRRM1-222ENST00000596378 IGKV2-28A0A075B6P5 120 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms