RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
LIG1-207ENST00000594759 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
LIG1-207ENST00000594759 C19orf84I3L1E1 186 aa9.06□□□□□ -0.96
LIG1-207ENST00000594759 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
LIG1-207ENST00000594759 AKAP13Q12802 2813 aa9.06□□□□□ -0.96
LIG1-207ENST00000594759 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
LIG1-207ENST00000594759 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
LIG1-207ENST00000594759 DEFB131AP59861 70 aa9.05□□□□□ -0.96
LIG1-207ENST00000594759 AMELXQ99217 191 aa9.05□□□□□ -0.96
LIG1-207ENST00000594759 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
LIG1-207ENST00000594759 TRGV4A0A0C4DH28 118 aa9.04□□□□□ -0.96
LIG1-207ENST00000594759 IGHV4-30-2A0A087WSY4 118 aa9.04□□□□□ -0.96
LIG1-207ENST00000594759 FUSP35637 526 aaKnown RBP eCLIP9.04□□□□□ -0.96
LIG1-207ENST00000594759 FHL2Q14192 279 aa9.04□□□□□ -0.96
LIG1-207ENST00000594759 RAI1Q7Z5J4 1906 aaPredicted RBP9.04□□□□□ -0.96
LIG1-207ENST00000594759 LY6LH3BQJ8 138 aa9.03□□□□□ -0.96
LIG1-207ENST00000594759 CCKP06307 115 aa9.03□□□□□ -0.96
LIG1-207ENST00000594759 RETNQ9HD89 108 aa9.03□□□□□ -0.96
LIG1-207ENST00000594759 PRB2P02812 416 aaPredicted RBP9.03□□□□□ -0.96
LIG1-207ENST00000594759 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 Q8N2B8 174 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.97
LIG1-207ENST00000594759 PCSK5Q92824 1860 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 TRBV7-6A0A0J9YX20 115 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.97
LIG1-207ENST00000594759 PROK1P58294 105 aa9.02□□□□□ -0.97
LIG1-207ENST00000594759 RMI2Q96E14 147 aa9.01□□□□□ -0.97
LIG1-207ENST00000594759 UBE2E2Q96LR5 201 aa9.01□□□□□ -0.97
LIG1-207ENST00000594759 TNRC18O15417 2968 aaPredicted RBP9.01□□□□□ -0.97
LIG1-207ENST00000594759 A0A087WYN8 130 aa9.01□□□□□ -0.97
LIG1-207ENST00000594759 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
LIG1-207ENST00000594759 MIFP14174 115 aa9□□□□□ -0.97
LIG1-207ENST00000594759 INSP01308 110 aa9□□□□□ -0.97
LIG1-207ENST00000594759 C2orf48Q96LS8 159 aa9□□□□□ -0.97
LIG1-207ENST00000594759 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
LIG1-207ENST00000594759 LINC01356Q8N9X3 169 aa9□□□□□ -0.97
LIG1-207ENST00000594759 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
LIG1-207ENST00000594759 Q96MF0 132 aa8.99□□□□□ -0.97
LIG1-207ENST00000594759 DSCR9P59020 149 aa8.99□□□□□ -0.97
LIG1-207ENST00000594759 SS18Q15532 418 aa8.99□□□□□ -0.97
LIG1-207ENST00000594759 STHQ8IWL8 128 aa8.99□□□□□ -0.97
LIG1-207ENST00000594759 KIF25-AS1Q9Y6Z4 181 aa8.99□□□□□ -0.97
LIG1-207ENST00000594759 EDN2P20800 178 aa8.98□□□□□ -0.97
LIG1-207ENST00000594759 IGHV4-59P01825 116 aa8.98□□□□□ -0.97
LIG1-207ENST00000594759 HECTD1Q9ULT8 2610 aa8.98□□□□□ -0.97
LIG1-207ENST00000594759 KLLNB2CW77 178 aa8.97□□□□□ -0.97
LIG1-207ENST00000594759 PMAIP1Q13794 54 aa8.97□□□□□ -0.97
LIG1-207ENST00000594759 FAM218AQ96MZ4 157 aa8.97□□□□□ -0.97
LIG1-207ENST00000594759 LINC01561Q8N1V8 128 aa8.97□□□□□ -0.97
LIG1-207ENST00000594759 LITAFQ99732 161 aa8.97□□□□□ -0.97
LIG1-207ENST00000594759 LINC00315P59091 139 aa8.96□□□□□ -0.97
LIG1-207ENST00000594759 PDE6GP18545 87 aa8.96□□□□□ -0.98
LIG1-207ENST00000594759 DEFB112Q30KQ8 113 aa8.96□□□□□ -0.98
LIG1-207ENST00000594759 SPTSSBQ8NFR3 76 aa8.96□□□□□ -0.98
LIG1-207ENST00000594759 LINC01600Q96MT4 127 aa8.95□□□□□ -0.98
LIG1-207ENST00000594759 DMXL2Q8TDJ6 3036 aa8.95□□□□□ -0.98
LIG1-207ENST00000594759 ODF3BA8MYP8 253 aa8.95□□□□□ -0.98
LIG1-207ENST00000594759 NREPQ16612 68 aa8.95□□□□□ -0.98
LIG1-207ENST00000594759 LMO4P61968 165 aa8.94□□□□□ -0.98
LIG1-207ENST00000594759 CFHR3Q02985 330 aa8.94□□□□□ -0.98
LIG1-207ENST00000594759 LRCOL1A6NCL2 159 aa8.94□□□□□ -0.98
LIG1-207ENST00000594759 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
LIG1-207ENST00000594759 C5orf56Q8N8D9 126 aa8.94□□□□□ -0.98
LIG1-207ENST00000594759 USP34Q70CQ2 3546 aa8.93□□□□□ -0.98
LIG1-207ENST00000594759 COX6A2Q02221 97 aa8.93□□□□□ -0.98
LIG1-207ENST00000594759 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 CCL18P55774 89 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 A0A1W2PPR1 153 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 Q8N3U1 123 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 SIRPDQ9H106 197 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 MUC3AQ02505 3323 aa8.92□□□□□ -0.98
LIG1-207ENST00000594759 ADGRG4Q8IZF6 3080 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 H3BUA1 57 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 Q5XG85 94 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 DEFB136Q30KP8 78 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
LIG1-207ENST00000594759 TRBV10-3A0A0K0K1G6 114 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 K7EMT4 169 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 CLPSL2Q6UWE3 100 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 CYSTM1Q9H1C7 97 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 LINC00474Q9P2X8 69 aa8.9□□□□□ -0.98
LIG1-207ENST00000594759 Q8N6K4 173 aa8.9□□□□□ -0.99
LIG1-207ENST00000594759 DMXL1Q9Y485 3027 aa8.9□□□□□ -0.99
LIG1-207ENST00000594759 C6orf99Q4VX62 202 aa8.89□□□□□ -0.99
LIG1-207ENST00000594759 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
LIG1-207ENST00000594759 K7EQD1 137 aa8.89□□□□□ -0.99
LIG1-207ENST00000594759 ESRGQ1W209 222 aa8.89□□□□□ -0.99
LIG1-207ENST00000594759 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
LIG1-207ENST00000594759 PRM2P04554 102 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 ZNF575Q86XF7 245 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 TMEM254Q8TBM7 123 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 BPY2O14599 106 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 C11orf71Q6IPW1 123 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
LIG1-207ENST00000594759 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
LIG1-207ENST00000594759 J3QKU1 62 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1046.7 ms