RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 C7orf33Q8WU49 177 aa11.06□□□□□ -0.64
IRF3-208ENST00000594387 TMEM141Q96I45 108 aa11.06□□□□□ -0.64
IRF3-208ENST00000594387 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
IRF3-208ENST00000594387 COX19Q49B96 90 aa11.05□□□□□ -0.64
IRF3-208ENST00000594387 TEX43Q6ZNM6 134 aa11.05□□□□□ -0.64
IRF3-208ENST00000594387 C2orf88Q9BSF0 95 aa11.05□□□□□ -0.64
IRF3-208ENST00000594387 C2orf66Q6UXQ4 117 aa11.04□□□□□ -0.64
IRF3-208ENST00000594387 STPG4Q8N801 248 aa11.04□□□□□ -0.64
IRF3-208ENST00000594387 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
IRF3-208ENST00000594387 C2orf48Q96LS8 159 aa11.04□□□□□ -0.64
IRF3-208ENST00000594387 FLG2Q5D862 2391 aaPredicted RBP11.03□□□□□ -0.64
IRF3-208ENST00000594387 LOC107984640A0A0U1RRK4 108 aa11.03□□□□□ -0.64
IRF3-208ENST00000594387 SPAG11BQ08648 103 aa11.03□□□□□ -0.64
IRF3-208ENST00000594387 RPS10P5Q9NQ39 176 aa11.03□□□□□ -0.64
IRF3-208ENST00000594387 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
IRF3-208ENST00000594387 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 A0A096LNI7 61 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 F8WDY8 70 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 RHEBQ15382 184 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 PAPPA-AS1Q5QFB9 102 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 ORAOV1Q8WV07 137 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 GNB1LQ9BYB4 327 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 VCX2Q9H322 139 aa11.02□□□□□ -0.65
IRF3-208ENST00000594387 SRRM2Q9UQ35 2752 aaKnown RBP11.02□□□□□ -0.65
IRF3-208ENST00000594387 DNAH8Q96JB1 4490 aa11.01□□□□□ -0.65
IRF3-208ENST00000594387 Q6ZRU5 148 aa11.01□□□□□ -0.65
IRF3-208ENST00000594387 IGHV3OR16-9A0A0B4J2B5 98 aa11□□□□□ -0.65
IRF3-208ENST00000594387 NPSP0C0P6 89 aa11□□□□□ -0.65
IRF3-208ENST00000594387 GAGE2BQ13066 116 aa11□□□□□ -0.65
IRF3-208ENST00000594387 FAM104AQ969W3 186 aa11□□□□□ -0.65
IRF3-208ENST00000594387 MT-ND6P03923 174 aa10.99□□□□□ -0.65
IRF3-208ENST00000594387 NDUFA5Q16718 116 aa10.99□□□□□ -0.65
IRF3-208ENST00000594387 CARHSP1Q9Y2V2 147 aaKnown RBP10.99□□□□□ -0.65
IRF3-208ENST00000594387 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
IRF3-208ENST00000594387 NDUFA1O15239 70 aa10.98□□□□□ -0.65
IRF3-208ENST00000594387 KRTAP10-4P60372 401 aaPredicted RBP10.98□□□□□ -0.65
IRF3-208ENST00000594387 C10orf91Q5T1B1 145 aa10.98□□□□□ -0.65
IRF3-208ENST00000594387 LINC01549A6NIU2 74 aa10.97□□□□□ -0.65
IRF3-208ENST00000594387 SEC11AP67812 179 aa10.97□□□□□ -0.65
IRF3-208ENST00000594387 FABP9Q0Z7S8 132 aa10.97□□□□□ -0.65
IRF3-208ENST00000594387 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
IRF3-208ENST00000594387 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
IRF3-208ENST00000594387 FAT1Q14517 4588 aa10.96□□□□□ -0.65
IRF3-208ENST00000594387 A0A087WZ39 114 aa10.96□□□□□ -0.65
IRF3-208ENST00000594387 OXTP01178 125 aa10.96□□□□□ -0.65
IRF3-208ENST00000594387 PTTG1IPP53801 180 aa10.96□□□□□ -0.65
IRF3-208ENST00000594387 RPL18AQ02543 176 aaKnown RBP10.96□□□□□ -0.65
IRF3-208ENST00000594387 SMCO4Q9NRQ5 59 aa10.96□□□□□ -0.65
IRF3-208ENST00000594387 VPS13BQ7Z7G8 4022 aa10.95□□□□□ -0.66
IRF3-208ENST00000594387 UBE2D1P51668 147 aa10.95□□□□□ -0.66
IRF3-208ENST00000594387 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
IRF3-208ENST00000594387 SNAPINO95295 136 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 APOC3P02656 99 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 PRSS2P07478 247 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 TOMM6Q96B49 74 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 SCGB3A1Q96QR1 104 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 AMELXQ99217 191 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 TIMM17AQ99595 171 aa10.94□□□□□ -0.66
IRF3-208ENST00000594387 ALKBH7Q9BT30 221 aaPredicted RBP10.94□□□□□ -0.66
IRF3-208ENST00000594387 MRPL35Q9NZE8 188 aaKnown RBP10.94□□□□□ -0.66
IRF3-208ENST00000594387 DMBT1Q9UGM3 2413 aaPredicted RBP10.94□□□□□ -0.66
IRF3-208ENST00000594387 IGIPA6NJ69 53 aa10.93□□□□□ -0.66
IRF3-208ENST00000594387 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
IRF3-208ENST00000594387 LINC01561Q8N1V8 128 aa10.93□□□□□ -0.66
IRF3-208ENST00000594387 GEMIN7Q9H840 131 aaKnown RBP10.93□□□□□ -0.66
IRF3-208ENST00000594387 HERVK_113P63121 156 aa10.92□□□□□ -0.66
IRF3-208ENST00000594387 ERASQ7Z444 233 aa10.92□□□□□ -0.66
IRF3-208ENST00000594387 SVBPQ8N300 66 aa10.92□□□□□ -0.66
IRF3-208ENST00000594387 PACRGQ96M98 296 aaPredicted RBP10.92□□□□□ -0.66
IRF3-208ENST00000594387 A0A0J9YXV3 536 aa10.91□□□□□ -0.66
IRF3-208ENST00000594387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
IRF3-208ENST00000594387 ZC2HC1BQ5TFG8 222 aa10.91□□□□□ -0.66
IRF3-208ENST00000594387 TRAPPC1Q9Y5R8 145 aa10.91□□□□□ -0.66
IRF3-208ENST00000594387 UNQ6190/PRO20217Q6UXQ8 127 aa10.9□□□□□ -0.66
IRF3-208ENST00000594387 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
IRF3-208ENST00000594387 CKS1BP61024 79 aa10.89□□□□□ -0.67
IRF3-208ENST00000594387 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
IRF3-208ENST00000594387 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
IRF3-208ENST00000594387 TRBV30A0A0K0K1B3 111 aa10.88□□□□□ -0.67
IRF3-208ENST00000594387 HNRNPA3P51991 378 aaKnown RBP10.88□□□□□ -0.67
IRF3-208ENST00000594387 Q6ZRP5 223 aa10.88□□□□□ -0.67
IRF3-208ENST00000594387 FAM19A3Q7Z5A8 133 aa10.88□□□□□ -0.67
IRF3-208ENST00000594387 LINC01546A6NGU7 62 aa10.87□□□□□ -0.67
IRF3-208ENST00000594387 PRR3P79522 188 aaKnown RBP10.87□□□□□ -0.67
IRF3-208ENST00000594387 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
IRF3-208ENST00000594387 TLX1NBP0CAT3 122 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 KIAA0087Q14695 138 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 C10orf25Q5T742 122 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 C6orf48Q9UBA6 75 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
IRF3-208ENST00000594387 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 RAB5BP61020 215 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 C2orf82Q6UX34 121 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 Q8IZM0 81 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 LINC00469Q8N7U9 141 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 CDKN2A-AS1Q9UH64 79 aa10.84□□□□□ -0.67
IRF3-208ENST00000594387 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
IRF3-208ENST00000594387 LINC00614P0C842 121 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms