RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 C5orf38Q86SI9 138 aa12.09□□□□□ -0.47
LTBP4-208ENST00000593738 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
LTBP4-208ENST00000593738 MYCBP2O75592 4640 aa12.08□□□□□ -0.48
LTBP4-208ENST00000593738 IGKV2-24A0A0C4DH68 120 aa12.08□□□□□ -0.48
LTBP4-208ENST00000593738 A0A096LNI7 61 aa12.07□□□□□ -0.48
LTBP4-208ENST00000593738 IGHV3OR16-9A0A0B4J2B5 98 aa12.07□□□□□ -0.48
LTBP4-208ENST00000593738 ORMDL2Q53FV1 153 aa12.07□□□□□ -0.48
LTBP4-208ENST00000593738 COMMD7Q86VX2 200 aa12.07□□□□□ -0.48
LTBP4-208ENST00000593738 OR10D4PQ8NGN7 298 aa12.07□□□□□ -0.48
LTBP4-208ENST00000593738 NXT2Q9NPJ8 142 aaKnown RBP12.07□□□□□ -0.48
LTBP4-208ENST00000593738 F8WDY8 70 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 S100PP25815 95 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 STPG4Q8N801 248 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 C7orf33Q8WU49 177 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 TMEM141Q96I45 108 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 CAMK2N2Q96S95 79 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 CYSLTR1Q9Y271 337 aa12.06□□□□□ -0.48
LTBP4-208ENST00000593738 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
LTBP4-208ENST00000593738 OXTP01178 125 aa12.05□□□□□ -0.48
LTBP4-208ENST00000593738 NPSP0C0P6 89 aa12.05□□□□□ -0.48
LTBP4-208ENST00000593738 G0S2P27469 103 aa12.05□□□□□ -0.48
LTBP4-208ENST00000593738 LOC107984640A0A0U1RRK4 108 aa12.04□□□□□ -0.48
LTBP4-208ENST00000593738 SPAG11BQ08648 103 aa12.04□□□□□ -0.48
LTBP4-208ENST00000593738 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
LTBP4-208ENST00000593738 C2orf66Q6UXQ4 117 aa12.04□□□□□ -0.48
LTBP4-208ENST00000593738 Q6ZRU5 148 aa12.04□□□□□ -0.48
LTBP4-208ENST00000593738 TGIF2-C20orf24A0A0A6YYL0 155 aa12.03□□□□□ -0.48
LTBP4-208ENST00000593738 RNF151Q2KHN1 245 aa12.03□□□□□ -0.48
LTBP4-208ENST00000593738 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
LTBP4-208ENST00000593738 GNB1LQ9BYB4 327 aa12.03□□□□□ -0.48
LTBP4-208ENST00000593738 COX19Q49B96 90 aa12.02□□□□□ -0.49
LTBP4-208ENST00000593738 Q6ZN92 141 aa12.02□□□□□ -0.49
LTBP4-208ENST00000593738 ORAOV1Q8WV07 137 aa12.02□□□□□ -0.49
LTBP4-208ENST00000593738 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
LTBP4-208ENST00000593738 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
LTBP4-208ENST00000593738 LINC00242Q5T6M2 205 aa12.01□□□□□ -0.49
LTBP4-208ENST00000593738 CARHSP1Q9Y2V2 147 aaKnown RBP12.01□□□□□ -0.49
LTBP4-208ENST00000593738 A0A087WZ39 114 aa12□□□□□ -0.49
LTBP4-208ENST00000593738 RHEBQ15382 184 aa12□□□□□ -0.49
LTBP4-208ENST00000593738 KIAA1644Q3SXP7 199 aa12□□□□□ -0.49
LTBP4-208ENST00000593738 VCX2Q9H322 139 aa12□□□□□ -0.49
LTBP4-208ENST00000593738 IGIPA6NJ69 53 aa11.99□□□□□ -0.49
LTBP4-208ENST00000593738 UBE2D1P51668 147 aa11.99□□□□□ -0.49
LTBP4-208ENST00000593738 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
LTBP4-208ENST00000593738 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
LTBP4-208ENST00000593738 AMELXQ99217 191 aa11.99□□□□□ -0.49
LTBP4-208ENST00000593738 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
LTBP4-208ENST00000593738 NDUFA1O15239 70 aa11.98□□□□□ -0.49
LTBP4-208ENST00000593738 GAGE2BQ13066 116 aa11.98□□□□□ -0.49
LTBP4-208ENST00000593738 LINC01561Q8N1V8 128 aa11.98□□□□□ -0.49
LTBP4-208ENST00000593738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.97□□□□□ -0.49
LTBP4-208ENST00000593738 MT-ND6P03923 174 aa11.97□□□□□ -0.49
LTBP4-208ENST00000593738 LINC00173Q6ZV60 143 aa11.97□□□□□ -0.49
LTBP4-208ENST00000593738 RPS10P5Q9NQ39 176 aa11.97□□□□□ -0.49
LTBP4-208ENST00000593738 HERC1Q15751 4861 aa11.96□□□□□ -0.49
LTBP4-208ENST00000593738 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
LTBP4-208ENST00000593738 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
LTBP4-208ENST00000593738 TIMM17AQ99595 171 aa11.96□□□□□ -0.49
LTBP4-208ENST00000593738 FAM19A3Q7Z5A8 133 aa11.95□□□□□ -0.5
LTBP4-208ENST00000593738 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
LTBP4-208ENST00000593738 LINC01546A6NGU7 62 aa11.94□□□□□ -0.5
LTBP4-208ENST00000593738 SEC11AP67812 179 aa11.94□□□□□ -0.5
LTBP4-208ENST00000593738 RPL18AQ02543 176 aaKnown RBP11.94□□□□□ -0.5
LTBP4-208ENST00000593738 PRR3P79522 188 aaKnown RBP11.93□□□□□ -0.5
LTBP4-208ENST00000593738 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
LTBP4-208ENST00000593738 ERASQ7Z444 233 aa11.93□□□□□ -0.5
LTBP4-208ENST00000593738 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
LTBP4-208ENST00000593738 TLX1NBP0CAT3 122 aa11.92□□□□□ -0.5
LTBP4-208ENST00000593738 ZC2HC1BQ5TFG8 222 aa11.92□□□□□ -0.5
LTBP4-208ENST00000593738 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
LTBP4-208ENST00000593738 MRPL18Q9H0U6 180 aaKnown RBP11.92□□□□□ -0.5
LTBP4-208ENST00000593738 HERVK_113P63121 156 aa11.91□□□□□ -0.5
LTBP4-208ENST00000593738 FABP9Q0Z7S8 132 aa11.91□□□□□ -0.5
LTBP4-208ENST00000593738 C10orf25Q5T742 122 aa11.91□□□□□ -0.5
LTBP4-208ENST00000593738 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
LTBP4-208ENST00000593738 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
LTBP4-208ENST00000593738 A0A1W2PNN7 141 aa11.9□□□□□ -0.5
LTBP4-208ENST00000593738 C6orf48Q9UBA6 75 aa11.9□□□□□ -0.5
LTBP4-208ENST00000593738 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
LTBP4-208ENST00000593738 C9orf116Q5BN46 136 aaPredicted RBP11.89□□□□□ -0.51
LTBP4-208ENST00000593738 Q6ZRP5 223 aa11.89□□□□□ -0.51
LTBP4-208ENST00000593738 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
LTBP4-208ENST00000593738 SNAPINO95295 136 aa11.88□□□□□ -0.51
LTBP4-208ENST00000593738 FA2HQ7L5A8 372 aa11.88□□□□□ -0.51
LTBP4-208ENST00000593738 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
LTBP4-208ENST00000593738 SMCO4Q9NRQ5 59 aa11.88□□□□□ -0.51
LTBP4-208ENST00000593738 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
LTBP4-208ENST00000593738 APOC3P02656 99 aa11.87□□□□□ -0.51
LTBP4-208ENST00000593738 PRSS2P07478 247 aa11.87□□□□□ -0.51
LTBP4-208ENST00000593738 SVBPQ8N300 66 aa11.87□□□□□ -0.51
LTBP4-208ENST00000593738 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
LTBP4-208ENST00000593738 C6orf226Q5I0X4 101 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 Q8IZM0 81 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
LTBP4-208ENST00000593738 CKS1BP61024 79 aa11.84□□□□□ -0.51
LTBP4-208ENST00000593738 SPINK6Q6UWN8 80 aa11.84□□□□□ -0.51
LTBP4-208ENST00000593738 FAT3Q8TDW7 4589 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms