RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 A0A0J9YXV3 536 aa6.38□□□□□ -1.39
DDX39A-220ENST00000593008 LEPROTL1O95214 131 aa6.38□□□□□ -1.39
DDX39A-220ENST00000593008 UBE2D1P51668 147 aa6.38□□□□□ -1.39
DDX39A-220ENST00000593008 MIAQ16674 131 aa6.38□□□□□ -1.39
DDX39A-220ENST00000593008 IGLV4-69A0A075B6H9 119 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.37□□□□□ -1.39
DDX39A-220ENST00000593008 FOXI1Q12951 378 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 LINC00242Q5T6M2 205 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 TEX43Q6ZNM6 134 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 IFI27L1Q96BM0 104 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 VCX2Q9H322 139 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
DDX39A-220ENST00000593008 NPSP0C0P6 89 aa6.36□□□□□ -1.39
DDX39A-220ENST00000593008 C14orf177Q52M58 125 aa6.36□□□□□ -1.39
DDX39A-220ENST00000593008 Q6ZN92 141 aa6.36□□□□□ -1.39
DDX39A-220ENST00000593008 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
DDX39A-220ENST00000593008 HIST1H2BLQ99880 126 aa6.36□□□□□ -1.39
DDX39A-220ENST00000593008 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
DDX39A-220ENST00000593008 A0A087WTM6 91 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 LRCOL1A6NCL2 159 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 C5orf52A6NGY3 159 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 ATP5LO75964 103 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 S100A6P06703 90 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 PMVKQ15126 192 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 SS18Q15532 418 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 CFAP161Q6P656 301 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 LINC00526Q96FQ7 95 aa6.35□□□□□ -1.39
DDX39A-220ENST00000593008 MRPL35Q9NZE8 188 aaKnown RBP6.35□□□□□ -1.39
DDX39A-220ENST00000593008 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 PRSS1P07477 247 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 KRTDAPP60985 99 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 ODF1Q14990 250 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 C2orf88Q9BSF0 95 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 CHAC1Q9BUX1 264 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 PCLOQ9Y6V0 5065 aa6.34□□□□□ -1.39
DDX39A-220ENST00000593008 USP17L23D6RBM5 183 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 SEC11AP67812 179 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 CDKN2A-AS1Q9UH64 79 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
DDX39A-220ENST00000593008 CHTOPQ9Y3Y2 248 aaKnown RBP6.33□□□□□ -1.4
DDX39A-220ENST00000593008 IGHV3-64A0A075B6Q5 118 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 IGLC3P0DOY3 106 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
DDX39A-220ENST00000593008 CD164L2Q6UWJ8 174 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
DDX39A-220ENST00000593008 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
DDX39A-220ENST00000593008 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
DDX39A-220ENST00000593008 COX7A2LO14548 114 aa6.31□□□□□ -1.4
DDX39A-220ENST00000593008 S100A2P29034 98 aa6.31□□□□□ -1.4
DDX39A-220ENST00000593008 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
DDX39A-220ENST00000593008 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
DDX39A-220ENST00000593008 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
DDX39A-220ENST00000593008 HSPG2P98160 4391 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 RYR1P21817 5038 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 IGLV5-45A0A087WSX0 123 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 TINCRA0A1B0GVN0 87 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 F8VRH5 84 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 APOMO95445 188 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 LINC01620Q4KN68 170 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 ATOH7Q8N100 152 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 MAP1LC3CQ9BXW4 147 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 GEMIN7Q9H840 131 aaKnown RBP6.3□□□□□ -1.4
DDX39A-220ENST00000593008 PKIGQ9Y2B9 76 aa6.3□□□□□ -1.4
DDX39A-220ENST00000593008 SMIM1B2RUZ4 78 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 CDK2AP2O75956 126 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 SLPIP03973 132 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 CDPF1Q6NVV7 123 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 Q8N814 137 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
DDX39A-220ENST00000593008 A0A087WZ39 114 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 IGLV5-52A0A0A0MRZ9 124 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 hDV102S1A0JD36 115 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 MALP21145 153 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 HERVK_113P63121 156 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 TMEM170BQ5T4T1 132 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 LINC01545Q5VT33 79 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 ORAOV1Q8WV07 137 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
DDX39A-220ENST00000593008 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
DDX39A-220ENST00000593008 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
DDX39A-220ENST00000593008 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
DDX39A-220ENST00000593008 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
DDX39A-220ENST00000593008 MAJINQ3KP22 176 aa6.27□□□□□ -1.41
DDX39A-220ENST00000593008 PET117Q6UWS5 81 aa6.27□□□□□ -1.41
DDX39A-220ENST00000593008 TOMM7Q9P0U1 55 aa6.27□□□□□ -1.41
DDX39A-220ENST00000593008 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 TMEM223A0PJW6 202 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 DPM2O94777 84 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 IGKCP01834 107 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 GCSHP23434 173 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms