RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 ATP5LO75964 103 aa13.54□□□□□ -0.24
DNMT1-227ENST00000592342 SEC11AP67812 179 aa13.54□□□□□ -0.24
DNMT1-227ENST00000592342 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
DNMT1-227ENST00000592342 IGHV3OR16-9A0A0B4J2B5 98 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 SERF1AO75920 110 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 NDUFA6P56556 154 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 PMVKQ15126 192 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 PDZD11Q5EBL8 140 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 DNAH11Q96DT5 4516 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 BIRC6Q9NR09 4857 aa13.53□□□□□ -0.24
DNMT1-227ENST00000592342 KRTAP10-1P60331 282 aa13.52□□□□□ -0.25
DNMT1-227ENST00000592342 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.25
DNMT1-227ENST00000592342 HERVK_113P63121 156 aa13.51□□□□□ -0.25
DNMT1-227ENST00000592342 COX6A2Q02221 97 aa13.51□□□□□ -0.25
DNMT1-227ENST00000592342 LINC01620Q4KN68 170 aa13.51□□□□□ -0.25
DNMT1-227ENST00000592342 FAM19A2Q8N3H0 131 aa13.51□□□□□ -0.25
DNMT1-227ENST00000592342 CST9LQ9H4G1 147 aa13.51□□□□□ -0.25
DNMT1-227ENST00000592342 CNBPP62633 177 aaKnown RBP13.5□□□□□ -0.25
DNMT1-227ENST00000592342 FAM19A3Q7Z5A8 133 aa13.5□□□□□ -0.25
DNMT1-227ENST00000592342 A0A0J9YXV3 536 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BKO60814 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BJP06899 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BOP23527 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BBP33778 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BDP58876 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BCP62807 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST2H2BEQ16778 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BHQ93079 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BNQ99877 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 HIST1H2BMQ99879 126 aa13.49□□□□□ -0.25
DNMT1-227ENST00000592342 A0A087WZ39 114 aa13.48□□□□□ -0.25
DNMT1-227ENST00000592342 C9orf163Q8N9P6 203 aa13.48□□□□□ -0.25
DNMT1-227ENST00000592342 ORAOV1Q8WV07 137 aa13.48□□□□□ -0.25
DNMT1-227ENST00000592342 LINC00526Q96FQ7 95 aa13.48□□□□□ -0.25
DNMT1-227ENST00000592342 SPAG11BQ08648 103 aa13.47□□□□□ -0.25
DNMT1-227ENST00000592342 OR10D4PQ8NGN7 298 aa13.47□□□□□ -0.25
DNMT1-227ENST00000592342 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 TINCRA0A1B0GVN0 87 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 SLPIP03973 132 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 LINC00310P59036 64 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 IFI27L1Q96BM0 104 aa13.46□□□□□ -0.25
DNMT1-227ENST00000592342 PACRGQ96M98 296 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-227ENST00000592342 DYNC1H1Q14204 4646 aaKnown RBP13.45□□□□□ -0.26
DNMT1-227ENST00000592342 LINC00469Q8N7U9 141 aa13.45□□□□□ -0.26
DNMT1-227ENST00000592342 PKHD1P08F94 4074 aa13.45□□□□□ -0.26
DNMT1-227ENST00000592342 NUPR1O60356 82 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 CDK2AP2O75956 126 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 LEPROTL1O95214 131 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 LINC01561Q8N1V8 128 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 CAMK2N2Q96S95 79 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 CDKN2A-AS1Q9UH64 79 aa13.44□□□□□ -0.26
DNMT1-227ENST00000592342 SYCNQ0VAF6 134 aa13.43□□□□□ -0.26
DNMT1-227ENST00000592342 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
DNMT1-227ENST00000592342 C2orf48Q96LS8 159 aa13.42□□□□□ -0.26
DNMT1-227ENST00000592342 CHAC1Q9BUX1 264 aa13.42□□□□□ -0.26
DNMT1-227ENST00000592342 HSPB8Q9UJY1 196 aa13.41□□□□□ -0.26
DNMT1-227ENST00000592342 PRSS2P07478 247 aa13.4□□□□□ -0.26
DNMT1-227ENST00000592342 IGLC3P0DOY3 106 aa13.4□□□□□ -0.26
DNMT1-227ENST00000592342 FABP4P15090 132 aa13.4□□□□□ -0.26
DNMT1-227ENST00000592342 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
DNMT1-227ENST00000592342 CHTOPQ9Y3Y2 248 aaKnown RBP13.4□□□□□ -0.26
DNMT1-227ENST00000592342 H3BRM9 83 aa13.39□□□□□ -0.27
DNMT1-227ENST00000592342 Q6ZRU5 148 aa13.39□□□□□ -0.27
DNMT1-227ENST00000592342 FAM30AQ9NZY2 134 aa13.39□□□□□ -0.27
DNMT1-227ENST00000592342 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
DNMT1-227ENST00000592342 IGLV5-45A0A087WSX0 123 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 F8WDY8 70 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 H0Y8G0 127 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 NDUFA1O15239 70 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 SDIM1Q6ZPB5 146 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 PKIGQ9Y2B9 76 aa13.38□□□□□ -0.27
DNMT1-227ENST00000592342 C6orf226Q5I0X4 101 aa13.36□□□□□ -0.27
DNMT1-227ENST00000592342 LRP1BQ9NZR2 4599 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 SPINK8P0C7L1 97 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 XGP55808 180 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 HAMPP81172 84 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 KIAA0087Q14695 138 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 Q6ZSA8 131 aa13.35□□□□□ -0.27
DNMT1-227ENST00000592342 SMIM1B2RUZ4 78 aa13.34□□□□□ -0.27
DNMT1-227ENST00000592342 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-227ENST00000592342 CKS1BP61024 79 aa13.34□□□□□ -0.27
DNMT1-227ENST00000592342 TMEM170BQ5T4T1 132 aa13.34□□□□□ -0.27
DNMT1-227ENST00000592342 Q8IZM0 81 aa13.34□□□□□ -0.27
DNMT1-227ENST00000592342 DPH3Q96FX2 82 aa13.34□□□□□ -0.27
DNMT1-227ENST00000592342 C11orf86A6NJI1 115 aa13.33□□□□□ -0.28
DNMT1-227ENST00000592342 F8VRH5 84 aa13.33□□□□□ -0.28
DNMT1-227ENST00000592342 MAP1LC3CQ9BXW4 147 aa13.33□□□□□ -0.28
DNMT1-227ENST00000592342 MRPL35Q9NZE8 188 aaKnown RBP13.33□□□□□ -0.28
DNMT1-227ENST00000592342 COA6Q5JTJ3 125 aaKnown RBP13.32□□□□□ -0.28
DNMT1-227ENST00000592342 C2orf82Q6UX34 121 aa13.32□□□□□ -0.28
DNMT1-227ENST00000592342 UNQ6190/PRO20217Q6UXQ8 127 aa13.32□□□□□ -0.28
DNMT1-227ENST00000592342 RNF151Q2KHN1 245 aa13.31□□□□□ -0.28
DNMT1-227ENST00000592342 COX7B2Q8TF08 81 aa13.31□□□□□ -0.28
DNMT1-227ENST00000592342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-227ENST00000592342 KIAA1109Q2LD37 5005 aa13.3□□□□□ -0.28
DNMT1-227ENST00000592342 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms