RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 UQCC3Q6UW78 93 aa11.48□□□□□ -0.57
CIRBP-237ENST00000592234 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
CIRBP-237ENST00000592234 COX7A2LO14548 114 aa11.47□□□□□ -0.57
CIRBP-237ENST00000592234 COMMD7Q86VX2 200 aa11.47□□□□□ -0.57
CIRBP-237ENST00000592234 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
CIRBP-237ENST00000592234 MAP1LC3AQ9H492 121 aa11.46□□□□□ -0.57
CIRBP-237ENST00000592234 SPANXA1Q9NS26 97 aa11.46□□□□□ -0.57
CIRBP-237ENST00000592234 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
CIRBP-237ENST00000592234 IFITM10A6NMD0 228 aa11.44□□□□□ -0.58
CIRBP-237ENST00000592234 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
CIRBP-237ENST00000592234 CTDSP1Q9GZU7 261 aa11.43□□□□□ -0.58
CIRBP-237ENST00000592234 LAMTOR2Q9Y2Q5 125 aa11.43□□□□□ -0.58
CIRBP-237ENST00000592234 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
CIRBP-237ENST00000592234 PTTG1IPP53801 180 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 KIAA1644Q3SXP7 199 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 SPINK6Q6UWN8 80 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 Q8N8P6 123 aa11.42□□□□□ -0.58
CIRBP-237ENST00000592234 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
CIRBP-237ENST00000592234 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
CIRBP-237ENST00000592234 Q6ZRP5 223 aa11.41□□□□□ -0.58
CIRBP-237ENST00000592234 CAMK2N2Q96S95 79 aa11.41□□□□□ -0.58
CIRBP-237ENST00000592234 IMMP2LQ96T52 175 aa11.41□□□□□ -0.58
CIRBP-237ENST00000592234 SEC11CQ9BY50 192 aa11.41□□□□□ -0.58
CIRBP-237ENST00000592234 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
CIRBP-237ENST00000592234 APOMO95445 188 aa11.39□□□□□ -0.59
CIRBP-237ENST00000592234 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
CIRBP-237ENST00000592234 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
CIRBP-237ENST00000592234 REG3GQ6UW15 175 aa11.39□□□□□ -0.59
CIRBP-237ENST00000592234 A0A0J9YXV3 536 aa11.38□□□□□ -0.59
CIRBP-237ENST00000592234 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
CIRBP-237ENST00000592234 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
CIRBP-237ENST00000592234 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
CIRBP-237ENST00000592234 S100PP25815 95 aa11.37□□□□□ -0.59
CIRBP-237ENST00000592234 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
CIRBP-237ENST00000592234 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
CIRBP-237ENST00000592234 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
CIRBP-237ENST00000592234 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
CIRBP-237ENST00000592234 SRSF9Q13242 221 aaKnown RBP eCLIP11.36□□□□□ -0.593e-7■■□□□ 13.7
CIRBP-237ENST00000592234 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
CIRBP-237ENST00000592234 LRP2P98164 4655 aa11.35□□□□□ -0.59
CIRBP-237ENST00000592234 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
CIRBP-237ENST00000592234 A0A1W2PNN7 141 aa11.35□□□□□ -0.59
CIRBP-237ENST00000592234 RPL18AQ02543 176 aaKnown RBP11.35□□□□□ -0.59
CIRBP-237ENST00000592234 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
CIRBP-237ENST00000592234 TGIF2-C20orf24A0A0A6YYL0 155 aa11.34□□□□□ -0.59
CIRBP-237ENST00000592234 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
CIRBP-237ENST00000592234 ODF1Q14990 250 aa11.34□□□□□ -0.59
CIRBP-237ENST00000592234 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
CIRBP-237ENST00000592234 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
CIRBP-237ENST00000592234 RPS10P5Q9NQ39 176 aa11.34□□□□□ -0.59
CIRBP-237ENST00000592234 C9orf116Q5BN46 136 aaPredicted RBP11.33□□□□□ -0.6
CIRBP-237ENST00000592234 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
CIRBP-237ENST00000592234 Q6ZN92 141 aa11.33□□□□□ -0.6
CIRBP-237ENST00000592234 KRTAP10-8P60410 259 aa11.32□□□□□ -0.6
CIRBP-237ENST00000592234 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
CIRBP-237ENST00000592234 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
CIRBP-237ENST00000592234 UBE2D1P51668 147 aa11.31□□□□□ -0.6
CIRBP-237ENST00000592234 RNF151Q2KHN1 245 aa11.31□□□□□ -0.6
CIRBP-237ENST00000592234 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
CIRBP-237ENST00000592234 GNB1LQ9BYB4 327 aa11.31□□□□□ -0.6
CIRBP-237ENST00000592234 VCX2Q9H322 139 aa11.31□□□□□ -0.6
CIRBP-237ENST00000592234 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
CIRBP-237ENST00000592234 MT-ND6P03923 174 aa11.3□□□□□ -0.6
CIRBP-237ENST00000592234 RHEBQ15382 184 aa11.3□□□□□ -0.6
CIRBP-237ENST00000592234 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
CIRBP-237ENST00000592234 PSORS1C2Q9UIG4 136 aa11.3□□□□□ -0.6
CIRBP-237ENST00000592234 A0A087WZ39 114 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 K7EMI3 77 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 NDUFA1O15239 70 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 PHF5AQ7RTV0 110 aaKnown RBP11.29□□□□□ -0.6
CIRBP-237ENST00000592234 AMELXQ99217 191 aa11.29□□□□□ -0.6
CIRBP-237ENST00000592234 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
CIRBP-237ENST00000592234 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
CIRBP-237ENST00000592234 F8WDY8 70 aa11.28□□□□□ -0.6
CIRBP-237ENST00000592234 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
CIRBP-237ENST00000592234 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
CIRBP-237ENST00000592234 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
CIRBP-237ENST00000592234 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
CIRBP-237ENST00000592234 APOC3P02656 99 aa11.26□□□□□ -0.61
CIRBP-237ENST00000592234 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
CIRBP-237ENST00000592234 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
CIRBP-237ENST00000592234 COX19Q49B96 90 aa11.25□□□□□ -0.61
CIRBP-237ENST00000592234 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
CIRBP-237ENST00000592234 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
CIRBP-237ENST00000592234 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
CIRBP-237ENST00000592234 G0S2P27469 103 aa11.24□□□□□ -0.61
CIRBP-237ENST00000592234 TOMM7Q9P0U1 55 aa11.24□□□□□ -0.61
CIRBP-237ENST00000592234 NPSP0C0P6 89 aa11.23□□□□□ -0.61
CIRBP-237ENST00000592234 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
CIRBP-237ENST00000592234 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
CIRBP-237ENST00000592234 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
CIRBP-237ENST00000592234 TLX1NBP0CAT3 122 aa11.22□□□□□ -0.61
CIRBP-237ENST00000592234 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
CIRBP-237ENST00000592234 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
CIRBP-237ENST00000592234 FAM168BA1KXE4 195 aa11.21□□□□□ -0.61
CIRBP-237ENST00000592234 ERASQ7Z444 233 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms