RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 HIST1H2BHQ93079 126 aa6.7□□□□□ -1.34
SDF2-209ENST00000591903 TMEM141Q96I45 108 aa6.7□□□□□ -1.34
SDF2-209ENST00000591903 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
SDF2-209ENST00000591903 HIST1H2BNQ99877 126 aa6.7□□□□□ -1.34
SDF2-209ENST00000591903 HIST1H2BMQ99879 126 aa6.7□□□□□ -1.34
SDF2-209ENST00000591903 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
SDF2-209ENST00000591903 REG3AQ06141 175 aa6.69□□□□□ -1.34
SDF2-209ENST00000591903 Q6ZN92 141 aa6.69□□□□□ -1.34
SDF2-209ENST00000591903 Q9HAA7 133 aa6.69□□□□□ -1.34
SDF2-209ENST00000591903 PKHD1L1Q86WI1 4243 aa6.69□□□□□ -1.34
SDF2-209ENST00000591903 A0A096LNJ9 63 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 HSBP1O75506 76 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 ATP5LO75964 103 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 RPL39P62891 51 aaKnown RBP6.68□□□□□ -1.34
SDF2-209ENST00000591903 PDZD11Q5EBL8 140 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 ENHOQ6UWT2 76 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 LINC00269Q8N2A0 174 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 CIRBP-AS1Q8TBR5 109 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 AMELXQ99217 191 aa6.68□□□□□ -1.34
SDF2-209ENST00000591903 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 RPL37AP61513 92 aaKnown RBP6.67□□□□□ -1.34
SDF2-209ENST00000591903 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 Q8N3U1 123 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
SDF2-209ENST00000591903 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.66□□□□□ -1.34
SDF2-209ENST00000591903 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.66□□□□□ -1.34
SDF2-209ENST00000591903 SERF1AO75920 110 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 LINC00310P59036 64 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 SEC11AP67812 179 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 TEX43Q6ZNM6 134 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 Q6ZUT4 128 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 SCGB3A1Q96QR1 104 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 C2orf88Q9BSF0 95 aa6.66□□□□□ -1.34
SDF2-209ENST00000591903 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 WFDC2Q14508 124 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 SS18Q15532 418 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 Q6ZRU5 148 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 VCX2Q9H322 139 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
SDF2-209ENST00000591903 KRTAP26-1Q6PEX3 210 aa6.64□□□□□ -1.35
SDF2-209ENST00000591903 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
SDF2-209ENST00000591903 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
SDF2-209ENST00000591903 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 IFITM10A6NMD0 228 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 LEPROTL1O95214 131 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 TNXBP22105 4242 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 PMVKQ15126 192 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 LINC00173Q6ZV60 143 aa6.63□□□□□ -1.35
SDF2-209ENST00000591903 IGKV2D-24A0A075B6R9 120 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 LECT2O14960 151 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 UBE2D1P51668 147 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 HNRNPA3P51991 378 aaKnown RBP6.62□□□□□ -1.35
SDF2-209ENST00000591903 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 BAALCQ8WXS3 180 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
SDF2-209ENST00000591903 IFI27L1Q96BM0 104 aa6.62□□□□□ -1.35
SDF2-209ENST00000591903 IGHV3OR16-9A0A0B4J2B5 98 aa6.61□□□□□ -1.35
SDF2-209ENST00000591903 HERVK_113P63121 156 aa6.61□□□□□ -1.35
SDF2-209ENST00000591903 CFAP161Q6P656 301 aa6.61□□□□□ -1.35
SDF2-209ENST00000591903 CST9LQ9H4G1 147 aa6.61□□□□□ -1.35
SDF2-209ENST00000591903 IGLV5-45A0A087WSX0 123 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 TINCRA0A1B0GVN0 87 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 NUPR1O60356 82 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 NDUFA6P56556 154 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 FOXI1Q12951 378 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
SDF2-209ENST00000591903 OPRPNQ99935 248 aaPredicted RBP6.6□□□□□ -1.35
SDF2-209ENST00000591903 A0A087WZ39 114 aa6.59□□□□□ -1.35
SDF2-209ENST00000591903 S100A6P06703 90 aa6.59□□□□□ -1.35
SDF2-209ENST00000591903 AKR1D1P51857 326 aa6.59□□□□□ -1.35
SDF2-209ENST00000591903 IGLV10-54A0A075B6I4 117 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 IGHV1-58A0A0C4DH39 117 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 GAGE12HA6NDE8 117 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 F8WDY8 70 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 COX7A2LO14548 114 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 APOMO95445 188 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 IGLC3P0DOY3 106 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 XCL1P47992 114 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 RNASE13Q5GAN3 156 aaKnown RBP6.58□□□□□ -1.36
SDF2-209ENST00000591903 MAP1LC3CQ9BXW4 147 aa6.58□□□□□ -1.36
SDF2-209ENST00000591903 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
SDF2-209ENST00000591903 IGKV3OR2-268A0A0C4DH90 116 aa6.57□□□□□ -1.36
SDF2-209ENST00000591903 F8VRH5 84 aa6.57□□□□□ -1.36
SDF2-209ENST00000591903 PRSS1P07477 247 aa6.57□□□□□ -1.36
SDF2-209ENST00000591903 OR10D4PQ8NGN7 298 aa6.57□□□□□ -1.36
SDF2-209ENST00000591903 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
SDF2-209ENST00000591903 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
SDF2-209ENST00000591903 HIST3H2BBQ8N257 126 aa6.56□□□□□ -1.36
SDF2-209ENST00000591903 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
SDF2-209ENST00000591903 IGLV4-69A0A075B6H9 119 aa6.55□□□□□ -1.36
SDF2-209ENST00000591903 USP17L23D6RBM5 183 aa6.55□□□□□ -1.36
SDF2-209ENST00000591903 H3BRM9 83 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms