RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 Q8IZM0 81 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 Q8NA96 180 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 B9D2Q9BPU9 175 aa10.69□□□□□ -0.7
SMARCA4-214ENST00000589677 M0R378 163 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 PRYO14603 147 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 PMAIP1Q13794 54 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 DHRS4-AS1Q9P1J3 65 aa10.68□□□□□ -0.7
SMARCA4-214ENST00000589677 A0A087WYN8 130 aa10.67□□□□□ -0.7
SMARCA4-214ENST00000589677 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
SMARCA4-214ENST00000589677 DEFB113Q30KQ7 82 aa10.67□□□□□ -0.7
SMARCA4-214ENST00000589677 DEFB4AO15263 64 aa10.66□□□□□ -0.7
SMARCA4-214ENST00000589677 EML5Q05BV3 1969 aa10.66□□□□□ -0.7
SMARCA4-214ENST00000589677 ZNF73O43830 326 aaPredicted RBP10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 LAMA2P24043 3122 aaKnown RBP10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 PRR4Q16378 134 aa10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 CHCHD7Q9BUK0 85 aa10.65□□□□□ -0.7
SMARCA4-214ENST00000589677 F8W735 103 aaPredicted RBP10.64□□□□□ -0.71
SMARCA4-214ENST00000589677 Q8N3U1 123 aa10.64□□□□□ -0.71
SMARCA4-214ENST00000589677 HIGD2AQ9BW72 106 aa10.64□□□□□ -0.71
SMARCA4-214ENST00000589677 SBSPONQ8IVN8 264 aa10.64□□□□□ -0.71
SMARCA4-214ENST00000589677 TANC2Q9HCD6 1990 aa10.64□□□□□ -0.71
SMARCA4-214ENST00000589677 LINC00846Q9NV44 126 aa10.63□□□□□ -0.71
SMARCA4-214ENST00000589677 WFDC13Q8IUB5 93 aa10.62□□□□□ -0.71
SMARCA4-214ENST00000589677 BPTFQ12830 3046 aa10.62□□□□□ -0.71
SMARCA4-214ENST00000589677 TRBV7-6A0A0J9YX20 115 aa10.61□□□□□ -0.71
SMARCA4-214ENST00000589677 PTPRSQ13332 1948 aa10.61□□□□□ -0.71
SMARCA4-214ENST00000589677 Q6YL49 198 aa10.61□□□□□ -0.71
SMARCA4-214ENST00000589677 ZNF580Q9UK33 172 aa10.61□□□□□ -0.71
SMARCA4-214ENST00000589677 COX6A2Q02221 97 aa10.61□□□□□ -0.71
SMARCA4-214ENST00000589677 IGLV1-40P01703 118 aa10.6□□□□□ -0.71
SMARCA4-214ENST00000589677 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
SMARCA4-214ENST00000589677 ACACBO00763 2458 aa10.6□□□□□ -0.71
SMARCA4-214ENST00000589677 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 CACNA1AO00555 2505 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 BCE1O60756 84 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 TMEM254Q8TBM7 123 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 C11orf71Q6IPW1 123 aa10.59□□□□□ -0.71
SMARCA4-214ENST00000589677 A0A087WZ39 114 aa10.58□□□□□ -0.72
SMARCA4-214ENST00000589677 CASC2Q6XLA1 102 aa10.58□□□□□ -0.72
SMARCA4-214ENST00000589677 Q8N9L7 120 aa10.58□□□□□ -0.72
SMARCA4-214ENST00000589677 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
SMARCA4-214ENST00000589677 ANKHD1Q8IWZ3 2542 aaKnown RBP10.57□□□□□ -0.72
SMARCA4-214ENST00000589677 LRCOL1A6NCL2 159 aa10.57□□□□□ -0.72
SMARCA4-214ENST00000589677 CHD7Q9P2D1 2997 aa10.57□□□□□ -0.72
SMARCA4-214ENST00000589677 C14orf177Q52M58 125 aa10.56□□□□□ -0.72
SMARCA4-214ENST00000589677 CEP192Q8TEP8 1941 aa10.56□□□□□ -0.72
SMARCA4-214ENST00000589677 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
SMARCA4-214ENST00000589677 K7ERS5 55 aa10.56□□□□□ -0.72
SMARCA4-214ENST00000589677 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
SMARCA4-214ENST00000589677 ESRGQ1W209 222 aa10.55□□□□□ -0.72
SMARCA4-214ENST00000589677 Q6ZVQ6 151 aa10.55□□□□□ -0.72
SMARCA4-214ENST00000589677 CXCL6P80162 114 aa10.55□□□□□ -0.72
SMARCA4-214ENST00000589677 BBC3Q96PG8 261 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 RETNQ9HD89 108 aa10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 LINC01547P58512 204 aaPredicted RBP10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 HILS1P60008 231 aa10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
SMARCA4-214ENST00000589677 DNAJC9-AS1A6NH13 148 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 ZNF843Q8N446 348 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 IGKV2-24A0A0C4DH68 120 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 C4orf26Q17RF5 130 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 C10orf99Q6UWK7 81 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 LELP1Q5T871 98 aa10.53□□□□□ -0.72
SMARCA4-214ENST00000589677 A0A0J9YWU9 116 aa10.52□□□□□ -0.73
SMARCA4-214ENST00000589677 PSPHP1O15172 72 aa10.52□□□□□ -0.73
SMARCA4-214ENST00000589677 PRM2P04554 102 aa10.52□□□□□ -0.73
SMARCA4-214ENST00000589677 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.73
SMARCA4-214ENST00000589677 LINC00208Q96KT6 92 aa10.52□□□□□ -0.73
SMARCA4-214ENST00000589677 ARHGAP32A7KAX9 2087 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 KIR2DL5BQ8NHK3 375 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 KIF25-AS1Q9Y6Z4 181 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 C5orf42Q9H799 3197 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 CPAMD8Q8IZJ3 1885 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 A0A096LNI7 61 aa10.51□□□□□ -0.73
SMARCA4-214ENST00000589677 PRR14LQ5THK1 2151 aa10.5□□□□□ -0.73
SMARCA4-214ENST00000589677 RANBP2P49792 3224 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-214ENST00000589677 BRI3O95415 125 aa10.5□□□□□ -0.73
SMARCA4-214ENST00000589677 NAV3Q8IVL0 2385 aa10.5□□□□□ -0.73
SMARCA4-214ENST00000589677 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
SMARCA4-214ENST00000589677 LINC00575Q6W349 94 aa10.49□□□□□ -0.73
SMARCA4-214ENST00000589677 LINC00337Q8N6G1 96 aa10.49□□□□□ -0.73
SMARCA4-214ENST00000589677 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
SMARCA4-214ENST00000589677 BEAN1Q3B7T3 259 aa10.48□□□□□ -0.73
SMARCA4-214ENST00000589677 C1orf137Q5JT78 98 aa10.48□□□□□ -0.73
SMARCA4-214ENST00000589677 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
SMARCA4-214ENST00000589677 LAMA3Q16787 3333 aa10.48□□□□□ -0.73
SMARCA4-214ENST00000589677 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
SMARCA4-214ENST00000589677 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
SMARCA4-214ENST00000589677 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
SMARCA4-214ENST00000589677 EGFEM1PQ0D2K5 195 aa10.47□□□□□ -0.73
SMARCA4-214ENST00000589677 LINC01561Q8N1V8 128 aa10.47□□□□□ -0.73
SMARCA4-214ENST00000589677 LRP4O75096 1905 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms