RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 CEMP1Q6PRD7 247 aaPredicted RBP10.08□□□□□ -0.8
NEDD4L-223ENST00000588516 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
NEDD4L-223ENST00000588516 ANKRD29Q8N6D5 301 aa10.08□□□□□ -0.8
NEDD4L-223ENST00000588516 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
NEDD4L-223ENST00000588516 NACAE9PAV3 2078 aa10.08□□□□□ -0.8
NEDD4L-223ENST00000588516 TRBV10-2A0A0K0K1G8 114 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 A0A1B0GV72 72 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 H3BT86 120 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 ICOSQ9Y6W8 199 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 TRBV6-4A0A1B0GX49 114 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 CDKN2A-AS1Q9UH64 79 aa10.07□□□□□ -0.8
NEDD4L-223ENST00000588516 H7C2G1 150 aa10.06□□□□□ -0.8
NEDD4L-223ENST00000588516 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
NEDD4L-223ENST00000588516 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
NEDD4L-223ENST00000588516 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
NEDD4L-223ENST00000588516 SORL1Q92673 2214 aa10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 A0A1W2PRX2 142 aa10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 NDUFA7O95182 113 aa10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 CITED2Q99967 270 aaPredicted RBP10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
NEDD4L-223ENST00000588516 VWFP04275 2813 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 TRGV2A0A075B6R0 118 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 TRIAP1O43715 76 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 PRM2P04554 102 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 INSL3P51460 131 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 Q6ZTI0 123 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 CARD19Q96LW7 228 aa10.03□□□□□ -0.8
NEDD4L-223ENST00000588516 PF4P02776 101 aa10.02□□□□□ -0.81
NEDD4L-223ENST00000588516 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
NEDD4L-223ENST00000588516 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
NEDD4L-223ENST00000588516 Q9H8V8 135 aa10.02□□□□□ -0.81
NEDD4L-223ENST00000588516 NOP10Q9NPE3 64 aaKnown RBP10.02□□□□□ -0.81
NEDD4L-223ENST00000588516 TRGV4A0A0C4DH28 118 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE4Q13068 117 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE5Q13069 117 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
NEDD4L-223ENST00000588516 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
NEDD4L-223ENST00000588516 LST1O00453 97 aa10□□□□□ -0.81
NEDD4L-223ENST00000588516 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
NEDD4L-223ENST00000588516 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
NEDD4L-223ENST00000588516 UBE2WQ96B02 151 aa10□□□□□ -0.81
NEDD4L-223ENST00000588516 Q9UF83 564 aa10□□□□□ -0.81
NEDD4L-223ENST00000588516 KMT2CQ8NEZ4 4911 aaKnown RBP9.99□□□□□ -0.81
NEDD4L-223ENST00000588516 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
NEDD4L-223ENST00000588516 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
NEDD4L-223ENST00000588516 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
NEDD4L-223ENST00000588516 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE7O76087 117 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 COX6A2Q02221 97 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 KIR2DL5BQ8NHK3 375 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 NTN5Q8WTR8 489 aaPredicted RBP9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 ZNF625Q96I27 306 aaPredicted RBP9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 RYR3Q15413 4870 aa9.97□□□□□ -0.81
NEDD4L-223ENST00000588516 TRAV26-1A0A087WT03 109 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 COX7A2LO14548 114 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 CKS1BP61024 79 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 C11orf44Q8N8P7 122 aa9.96□□□□□ -0.82
NEDD4L-223ENST00000588516 F5H768 121 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 SNCGO76070 127 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 ACYP1P07311 99 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 CSNK1G2-AS1Q8NCQ2 148 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
NEDD4L-223ENST00000588516 A8MZ25 164 aa9.94□□□□□ -0.82
NEDD4L-223ENST00000588516 TRACP01848 142 aa9.94□□□□□ -0.82
NEDD4L-223ENST00000588516 GIG44P09565 113 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-223ENST00000588516 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
NEDD4L-223ENST00000588516 CMYA5Q8N3K9 4069 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 TRBV6-8A0A0A6YYG3 113 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 PLAC8L1A1L4L8 177 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 NPC2P61916 151 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 Q6Q795 121 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
NEDD4L-223ENST00000588516 XGP55808 180 aa9.92□□□□□ -0.82
NEDD4L-223ENST00000588516 FHL2Q14192 279 aa9.92□□□□□ -0.82
NEDD4L-223ENST00000588516 MT-ATP8P03928 68 aa9.91□□□□□ -0.82
NEDD4L-223ENST00000588516 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
NEDD4L-223ENST00000588516 IBA57-AS1B1ANH7 110 aa9.9□□□□□ -0.82
NEDD4L-223ENST00000588516 CRPP02741 224 aa9.9□□□□□ -0.82
NEDD4L-223ENST00000588516 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
NEDD4L-223ENST00000588516 GAGE2EQ4V326 116 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms