RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 IGHV3OR16-9A0A0B4J2B5 98 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 SMIM27A0A1W2PRY6 76 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 TCAPO15273 167 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 CKS2P33552 79 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 ADIRFQ15847 76 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 SMIM2Q9BVW6 85 aa11.8□□□□□ -0.52
TRAF4-216ENST00000586813 A0A1B0GW15 77 aa11.79□□□□□ -0.52
TRAF4-216ENST00000586813 F8WDY8 70 aa11.79□□□□□ -0.52
TRAF4-216ENST00000586813 TNFRSF6BO95407 300 aa11.79□□□□□ -0.52
TRAF4-216ENST00000586813 IMMP2LQ96T52 175 aa11.79□□□□□ -0.52
TRAF4-216ENST00000586813 SPANXA1Q9NS26 97 aa11.79□□□□□ -0.52
TRAF4-216ENST00000586813 NDUFA1O15239 70 aa11.78□□□□□ -0.52
TRAF4-216ENST00000586813 IGLV7-43P04211 117 aa11.78□□□□□ -0.52
TRAF4-216ENST00000586813 FAM168BA1KXE4 195 aa11.77□□□□□ -0.53
TRAF4-216ENST00000586813 HBBP68871 147 aa11.77□□□□□ -0.53
TRAF4-216ENST00000586813 MRPS36P82909 103 aaKnown RBP11.77□□□□□ -0.53
TRAF4-216ENST00000586813 C10orf25Q5T742 122 aa11.77□□□□□ -0.53
TRAF4-216ENST00000586813 DIRC1Q969H9 104 aa11.77□□□□□ -0.53
TRAF4-216ENST00000586813 NAT8Q9UHE5 227 aa11.77□□□□□ -0.53
TRAF4-216ENST00000586813 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
TRAF4-216ENST00000586813 D6R8Y8 96 aa11.76□□□□□ -0.53
TRAF4-216ENST00000586813 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
TRAF4-216ENST00000586813 KRTAP11-1Q8IUC1 163 aa11.76□□□□□ -0.53
TRAF4-216ENST00000586813 A0A087WZ39 114 aa11.75□□□□□ -0.53
TRAF4-216ENST00000586813 C9JQL5 133 aa11.75□□□□□ -0.53
TRAF4-216ENST00000586813 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
TRAF4-216ENST00000586813 PRR26Q8N8Z3 221 aa11.75□□□□□ -0.53
TRAF4-216ENST00000586813 C6orf48Q9UBA6 75 aa11.75□□□□□ -0.53
TRAF4-216ENST00000586813 NPYP01303 97 aa11.74□□□□□ -0.53
TRAF4-216ENST00000586813 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
TRAF4-216ENST00000586813 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
TRAF4-216ENST00000586813 F8W036 122 aa11.73□□□□□ -0.53
TRAF4-216ENST00000586813 H0Y9J4 135 aa11.73□□□□□ -0.53
TRAF4-216ENST00000586813 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
TRAF4-216ENST00000586813 TGIF2-C20orf24A0A0A6YYL0 155 aa11.72□□□□□ -0.53
TRAF4-216ENST00000586813 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
TRAF4-216ENST00000586813 S100A8P05109 93 aa11.72□□□□□ -0.53
TRAF4-216ENST00000586813 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
TRAF4-216ENST00000586813 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
TRAF4-216ENST00000586813 PPBPP02775 128 aa11.71□□□□□ -0.53
TRAF4-216ENST00000586813 RAB14P61106 215 aa11.71□□□□□ -0.53
TRAF4-216ENST00000586813 PEA15Q15121 130 aa11.71□□□□□ -0.53
TRAF4-216ENST00000586813 IFI27P40305 119 aaPredicted RBP11.7□□□□□ -0.54
TRAF4-216ENST00000586813 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
TRAF4-216ENST00000586813 KIAA0087Q14695 138 aa11.7□□□□□ -0.54
TRAF4-216ENST00000586813 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
TRAF4-216ENST00000586813 M0QXV9 152 aa11.68□□□□□ -0.54
TRAF4-216ENST00000586813 LINC00242Q5T6M2 205 aa11.68□□□□□ -0.54
TRAF4-216ENST00000586813 ORMDL3Q8N138 153 aa11.68□□□□□ -0.54
TRAF4-216ENST00000586813 PYGO1Q9Y3Y4 419 aa11.68□□□□□ -0.54
TRAF4-216ENST00000586813 IGLV1-50A0A075B6I6 118 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 IGLV4-3A0A075B6K6 122 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 TRBV30A0A0K0K1B3 111 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 RAB5AP20339 215 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 UBE2BP63146 152 aa11.67□□□□□ -0.54
TRAF4-216ENST00000586813 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
TRAF4-216ENST00000586813 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
TRAF4-216ENST00000586813 NDUFC2-KCTD14E9PQ53 114 aa11.65□□□□□ -0.54
TRAF4-216ENST00000586813 PRELID3AQ96N28 172 aa11.65□□□□□ -0.54
TRAF4-216ENST00000586813 C9orf129Q5T035 196 aaKnown RBP11.64□□□□□ -0.55
TRAF4-216ENST00000586813 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
TRAF4-216ENST00000586813 ATP5L2Q7Z4Y8 100 aa11.64□□□□□ -0.55
TRAF4-216ENST00000586813 TEX43Q6ZNM6 134 aa11.63□□□□□ -0.55
TRAF4-216ENST00000586813 PACRGQ96M98 296 aaPredicted RBP11.63□□□□□ -0.55
TRAF4-216ENST00000586813 UBE2D1P51668 147 aa11.62□□□□□ -0.55
TRAF4-216ENST00000586813 LINC01561Q8N1V8 128 aa11.62□□□□□ -0.55
TRAF4-216ENST00000586813 C2orf88Q9BSF0 95 aa11.61□□□□□ -0.55
TRAF4-216ENST00000586813 PRSS47A8MTI9 375 aa11.6□□□□□ -0.55
TRAF4-216ENST00000586813 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
TRAF4-216ENST00000586813 LOC389332A0A1B0GUA5 103 aa11.59□□□□□ -0.55
TRAF4-216ENST00000586813 RPL13AP40429 203 aaKnown RBP11.59□□□□□ -0.55
TRAF4-216ENST00000586813 ZC2HC1BQ5TFG8 222 aa11.59□□□□□ -0.55
TRAF4-216ENST00000586813 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
TRAF4-216ENST00000586813 MAP1LC3AQ9H492 121 aa11.59□□□□□ -0.55
TRAF4-216ENST00000586813 CYSLTR1Q9Y271 337 aa11.59□□□□□ -0.55
TRAF4-216ENST00000586813 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
TRAF4-216ENST00000586813 Q6ZN92 141 aa11.58□□□□□ -0.56
TRAF4-216ENST00000586813 PRSS2P07478 247 aa11.57□□□□□ -0.56
TRAF4-216ENST00000586813 AMELXQ99217 191 aa11.57□□□□□ -0.56
TRAF4-216ENST00000586813 CKS1BP61024 79 aa11.56□□□□□ -0.56
TRAF4-216ENST00000586813 Q8N8P6 123 aa11.56□□□□□ -0.56
TRAF4-216ENST00000586813 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
TRAF4-216ENST00000586813 CLLU1Q5K131 121 aa11.55□□□□□ -0.56
TRAF4-216ENST00000586813 VCX2Q9H322 139 aa11.55□□□□□ -0.56
TRAF4-216ENST00000586813 MUC2Q02817 5179 aa11.54□□□□□ -0.56
TRAF4-216ENST00000586813 ZNF861PO60384 105 aa11.54□□□□□ -0.56
TRAF4-216ENST00000586813 PRR4Q16378 134 aa11.54□□□□□ -0.56
TRAF4-216ENST00000586813 Q8IZM0 81 aa11.54□□□□□ -0.56
TRAF4-216ENST00000586813 LINC00469Q8N7U9 141 aa11.54□□□□□ -0.56
TRAF4-216ENST00000586813 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
TRAF4-216ENST00000586813 NPSP0C0P6 89 aa11.53□□□□□ -0.56
TRAF4-216ENST00000586813 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
TRAF4-216ENST00000586813 C6orf226Q5I0X4 101 aa11.53□□□□□ -0.56
TRAF4-216ENST00000586813 FAM19A3Q7Z5A8 133 aa11.53□□□□□ -0.56
TRAF4-216ENST00000586813 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
TRAF4-216ENST00000586813 IGIPA6NJ69 53 aa11.52□□□□□ -0.57
TRAF4-216ENST00000586813 NUPR1O60356 82 aa11.52□□□□□ -0.57
TRAF4-216ENST00000586813 ALKBH7Q9BT30 221 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-216ENST00000586813 XAGE1AQ9HD64 81 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms