RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 PRIMA1Q86XR5 153 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 WNK1Q9H4A3 2382 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 TLN2Q9Y4G6 2542 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 GAGE2BQ13066 116 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
CDK5RAP3-237ENST00000585163 USP24Q9UPU5 2620 aa10.08□□□□□ -0.8
CDK5RAP3-237ENST00000585163 GIG44P09565 113 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-237ENST00000585163 COX7A2LO14548 114 aa10.07□□□□□ -0.8
CDK5RAP3-237ENST00000585163 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
CDK5RAP3-237ENST00000585163 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
CDK5RAP3-237ENST00000585163 ZNF843Q8N446 348 aa10.07□□□□□ -0.8
CDK5RAP3-237ENST00000585163 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
CDK5RAP3-237ENST00000585163 NF1P21359 2839 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 FAM240AA0A1B0GVK7 77 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 Q6Q795 121 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 APCP25054 2843 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 UBE2L6O14933 153 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 ESM1Q9NQ30 184 aa10.06□□□□□ -0.8
CDK5RAP3-237ENST00000585163 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
CDK5RAP3-237ENST00000585163 CUBNO60494 3623 aa10.05□□□□□ -0.8
CDK5RAP3-237ENST00000585163 CMC4P56277 68 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-237ENST00000585163 SONP18583 2426 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-237ENST00000585163 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 ITPR3Q14573 2671 aa10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 TRGV2A0A075B6R0 118 aa10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 TRBV6-4A0A1B0GX49 114 aa10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-237ENST00000585163 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
CDK5RAP3-237ENST00000585163 SEC61GP60059 68 aa10.03□□□□□ -0.8
CDK5RAP3-237ENST00000585163 WFDC11Q8NEX6 87 aa10.03□□□□□ -0.8
CDK5RAP3-237ENST00000585163 OR13C6PQ8NH95 151 aa10.02□□□□□ -0.8
CDK5RAP3-237ENST00000585163 OVOL2Q9BRP0 275 aa10.02□□□□□ -0.8
CDK5RAP3-237ENST00000585163 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.8
CDK5RAP3-237ENST00000585163 SETXQ7Z333 2677 aaKnown RBP10.02□□□□□ -0.81
CDK5RAP3-237ENST00000585163 NIPBLQ6KC79 2804 aaeCLIP10.02□□□□□ -0.813e-6■■■■□ 20.4
CDK5RAP3-237ENST00000585163 C2CD3Q4AC94 2353 aa10.02□□□□□ -0.81
CDK5RAP3-237ENST00000585163 CSNK1G2-AS1Q8NCQ2 148 aa10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TRACP01848 142 aa10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TTC32Q5I0X7 151 aa10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
CDK5RAP3-237ENST00000585163 IGLV1-51P01701 117 aa10□□□□□ -0.81
CDK5RAP3-237ENST00000585163 RPL35AP18077 110 aaKnown RBP10□□□□□ -0.81
CDK5RAP3-237ENST00000585163 LINC01006Q8NI28 216 aa10□□□□□ -0.81
CDK5RAP3-237ENST00000585163 COX7B2Q8TF08 81 aa10□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TRGV4A0A0C4DH28 118 aa9.99□□□□□ -0.81
CDK5RAP3-237ENST00000585163 PF4P02776 101 aa9.99□□□□□ -0.81
CDK5RAP3-237ENST00000585163 HIST2H2BCQ6DN03 193 aa9.99□□□□□ -0.81
CDK5RAP3-237ENST00000585163 JMJD1CQ15652 2540 aa9.99□□□□□ -0.81
CDK5RAP3-237ENST00000585163 NBPF19A0A087WUL8 3843 aa9.99□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TRAV13-2A0A0B4J235 113 aa9.98□□□□□ -0.81
CDK5RAP3-237ENST00000585163 FHL2Q14192 279 aa9.98□□□□□ -0.81
CDK5RAP3-237ENST00000585163 FAM222AQ5U5X8 452 aa9.98□□□□□ -0.81
CDK5RAP3-237ENST00000585163 C16orf95Q9H693 158 aa9.98□□□□□ -0.81
CDK5RAP3-237ENST00000585163 IGLV4-60A0A075B6I1 120 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 J3KT08 172 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 ACYP1P07311 99 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 PLA2G2AP14555 144 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 FAM218AQ96MZ4 157 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 IGHV3OR16-9A0A0B4J2B5 98 aa9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
CDK5RAP3-237ENST00000585163 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.81
CDK5RAP3-237ENST00000585163 FLNAP21333 2647 aaKnown RBP9.96□□□□□ -0.81
CDK5RAP3-237ENST00000585163 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
CDK5RAP3-237ENST00000585163 RNASE1P07998 156 aaKnown RBP9.96□□□□□ -0.82
CDK5RAP3-237ENST00000585163 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.82
CDK5RAP3-237ENST00000585163 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
CDK5RAP3-237ENST00000585163 IGKV2-28A0A075B6P5 120 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 LOC107984640A0A0U1RRK4 108 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 IGKV2D-28P01615 120 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 CRPP02741 224 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 SND1-IT1Q9HBX3 110 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 C22orf24Q9Y442 160 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 SETD2Q9BYW2 2564 aaPredicted RBP9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 TRBV7-7A0A0K0K1E9 115 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 CHCHD5Q9BSY4 110 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 CCDC168Q8NDH2 2452 aa9.95□□□□□ -0.82
CDK5RAP3-237ENST00000585163 A0A087WZ39 114 aa9.94□□□□□ -0.82
CDK5RAP3-237ENST00000585163 A0A1B0GX51 115 aa9.94□□□□□ -0.82
CDK5RAP3-237ENST00000585163 KRTAP1-1Q07627 177 aa9.93□□□□□ -0.82
CDK5RAP3-237ENST00000585163 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
CDK5RAP3-237ENST00000585163 LINC00158P58513 81 aa9.93□□□□□ -0.82
CDK5RAP3-237ENST00000585163 CCL18P55774 89 aa9.92□□□□□ -0.82
CDK5RAP3-237ENST00000585163 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
CDK5RAP3-237ENST00000585163 C5orf38Q86SI9 138 aa9.9□□□□□ -0.82
CDK5RAP3-237ENST00000585163 SMIM11BQ8TCY0 68 aa9.9□□□□□ -0.82
CDK5RAP3-237ENST00000585163 Q9HAA7 133 aa9.9□□□□□ -0.82
CDK5RAP3-237ENST00000585163 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.83
CDK5RAP3-237ENST00000585163 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.83
CDK5RAP3-237ENST00000585163 IMUPQ9GZP8 106 aa9.9□□□□□ -0.83
CDK5RAP3-237ENST00000585163 MALP21145 153 aa9.89□□□□□ -0.83
CDK5RAP3-237ENST00000585163 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
CDK5RAP3-237ENST00000585163 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms