RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 PYGO1Q9Y3Y4 419 aa8.43□□□□□ -1.06
SREBF1-223ENST00000584760 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 A0A096LNI7 61 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 IGHV3OR16-9A0A0B4J2B5 98 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 IFITM10A6NMD0 228 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 MALP21145 153 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 SYCNQ0VAF6 134 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 C5orf38Q86SI9 138 aa8.42□□□□□ -1.06
SREBF1-223ENST00000584760 IGLV4-69A0A075B6H9 119 aa8.41□□□□□ -1.06
SREBF1-223ENST00000584760 CARHSP1Q9Y2V2 147 aaKnown RBP8.41□□□□□ -1.06
SREBF1-223ENST00000584760 FAT3Q8TDW7 4589 aa8.41□□□□□ -1.06
SREBF1-223ENST00000584760 K7EMI3 77 aa8.4□□□□□ -1.06
SREBF1-223ENST00000584760 APOMO95445 188 aa8.4□□□□□ -1.06
SREBF1-223ENST00000584760 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
SREBF1-223ENST00000584760 NXT2Q9NPJ8 142 aaKnown RBP8.4□□□□□ -1.06
SREBF1-223ENST00000584760 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
SREBF1-223ENST00000584760 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
SREBF1-223ENST00000584760 S100PP25815 95 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 HNRNPA3P51991 378 aaKnown RBP8.39□□□□□ -1.07
SREBF1-223ENST00000584760 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 ORMDL2Q53FV1 153 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 C2orf66Q6UXQ4 117 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 Q6ZRU5 148 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 C2orf48Q96LS8 159 aa8.39□□□□□ -1.07
SREBF1-223ENST00000584760 RHEBQ15382 184 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 STPG4Q8N801 248 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 OR10D4PQ8NGN7 298 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
SREBF1-223ENST00000584760 IGIPA6NJ69 53 aa8.37□□□□□ -1.07
SREBF1-223ENST00000584760 UBE2D1P51668 147 aa8.37□□□□□ -1.07
SREBF1-223ENST00000584760 TEX43Q6ZNM6 134 aa8.37□□□□□ -1.07
SREBF1-223ENST00000584760 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
SREBF1-223ENST00000584760 GNB1LQ9BYB4 327 aa8.37□□□□□ -1.07
SREBF1-223ENST00000584760 A0A087WZ39 114 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 TGIF2-C20orf24A0A0A6YYL0 155 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 NPSP0C0P6 89 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 ZC2HC1BQ5TFG8 222 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 AMELXQ99217 191 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 C2orf88Q9BSF0 95 aa8.36□□□□□ -1.07
SREBF1-223ENST00000584760 LOC107984640A0A0U1RRK4 108 aa8.35□□□□□ -1.07
SREBF1-223ENST00000584760 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
SREBF1-223ENST00000584760 COX19Q49B96 90 aa8.35□□□□□ -1.07
SREBF1-223ENST00000584760 Q6ZN92 141 aa8.35□□□□□ -1.07
SREBF1-223ENST00000584760 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
SREBF1-223ENST00000584760 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
SREBF1-223ENST00000584760 MT-ND6P03923 174 aa8.34□□□□□ -1.07
SREBF1-223ENST00000584760 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
SREBF1-223ENST00000584760 MRPL35Q9NZE8 188 aaKnown RBP8.34□□□□□ -1.07
SREBF1-223ENST00000584760 LINC01546A6NGU7 62 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 F8WDY8 70 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 RNF151Q2KHN1 245 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 TIMM17AQ99595 171 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
SREBF1-223ENST00000584760 VCX2Q9H322 139 aa8.33□□□□□ -1.08
SREBF1-223ENST00000584760 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 NDUFA1O15239 70 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 G0S2P27469 103 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 GAGE2BQ13066 116 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 C10orf25Q5T742 122 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 FAM19A3Q7Z5A8 133 aa8.32□□□□□ -1.08
SREBF1-223ENST00000584760 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
SREBF1-223ENST00000584760 PRR3P79522 188 aaKnown RBP8.31□□□□□ -1.08
SREBF1-223ENST00000584760 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
SREBF1-223ENST00000584760 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
SREBF1-223ENST00000584760 C6orf48Q9UBA6 75 aa8.31□□□□□ -1.08
SREBF1-223ENST00000584760 APOC3P02656 99 aa8.3□□□□□ -1.08
SREBF1-223ENST00000584760 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
SREBF1-223ENST00000584760 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
SREBF1-223ENST00000584760 ERASQ7Z444 233 aa8.3□□□□□ -1.08
SREBF1-223ENST00000584760 A0A1W2PNN7 141 aa8.29□□□□□ -1.08
SREBF1-223ENST00000584760 TLX1NBP0CAT3 122 aa8.29□□□□□ -1.08
SREBF1-223ENST00000584760 FABP9Q0Z7S8 132 aa8.29□□□□□ -1.08
SREBF1-223ENST00000584760 SVBPQ8N300 66 aa8.29□□□□□ -1.08
SREBF1-223ENST00000584760 SNAPINO95295 136 aa8.28□□□□□ -1.08
SREBF1-223ENST00000584760 HERVK_113P63121 156 aa8.28□□□□□ -1.08
SREBF1-223ENST00000584760 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
SREBF1-223ENST00000584760 C9orf116Q5BN46 136 aaPredicted RBP8.28□□□□□ -1.08
SREBF1-223ENST00000584760 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
SREBF1-223ENST00000584760 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 SEC11AP67812 179 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 Q6ZRP5 223 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 FA2HQ7L5A8 372 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
SREBF1-223ENST00000584760 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
SREBF1-223ENST00000584760 C18orf32Q8TCD1 76 aa8.26□□□□□ -1.09
SREBF1-223ENST00000584760 SMCO4Q9NRQ5 59 aa8.26□□□□□ -1.09
SREBF1-223ENST00000584760 A0A096LNJ9 63 aa8.25□□□□□ -1.09
SREBF1-223ENST00000584760 Q8IZM0 81 aa8.25□□□□□ -1.09
SREBF1-223ENST00000584760 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms