RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 FSHBP01225 129 aa8.46□□□□□ -1.06
CDK5RAP3-231ENST00000584063 CFHR3Q02985 330 aa8.46□□□□□ -1.06
CDK5RAP3-231ENST00000584063 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
CDK5RAP3-231ENST00000584063 NDUFA11Q86Y39 141 aa8.45□□□□□ -1.06
CDK5RAP3-231ENST00000584063 NSD1Q96L73 2696 aaPredicted RBP8.45□□□□□ -1.06
CDK5RAP3-231ENST00000584063 Q6ZSV7 163 aa8.45□□□□□ -1.06
CDK5RAP3-231ENST00000584063 SMIM26A0A096LP01 95 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 BEAN1Q3B7T3 259 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 FAM19A3Q7Z5A8 133 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 DNAJC9-AS1A6NH13 148 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 GHRHP01286 108 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 HERVK_113P61574 105 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 MDFIQ99750 246 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 PRSS2P07478 247 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 UBE2D1P51668 147 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 Q1RN00 199 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 C6orf223Q8N319 242 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 ESM1Q9NQ30 184 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 LENEPQ9Y5L5 61 aa8.44□□□□□ -1.06
CDK5RAP3-231ENST00000584063 ANK3Q12955 4377 aaKnown RBP8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 IGHV4OR15-8A0A075B7B6 117 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 A0A087WW49 117 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 H3BUA1 57 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 ZNF876PQ49A33 203 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 LYRM9A8MSI8 78 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
CDK5RAP3-231ENST00000584063 IGHV3-38A0A0C4DH36 116 aa8.42□□□□□ -1.06
CDK5RAP3-231ENST00000584063 EPM2AB3EWF7 344 aa8.42□□□□□ -1.06
CDK5RAP3-231ENST00000584063 FAM222AQ5U5X8 452 aa8.42□□□□□ -1.06
CDK5RAP3-231ENST00000584063 KLLNB2CW77 178 aa8.42□□□□□ -1.06
CDK5RAP3-231ENST00000584063 SLURP1P55000 103 aa8.42□□□□□ -1.06
CDK5RAP3-231ENST00000584063 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 MUSTN1Q8IVN3 82 aa8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 DAND5Q8N907 189 aa8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 IGHV3-16A0A0C4DH30 117 aa8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
CDK5RAP3-231ENST00000584063 M0QY20 66 aa8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 RBMY1A1P0DJD3 496 aaKnown RBP8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 RBMY1FQ15415 496 aaKnown RBP8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 NSUN5P1Q3KNT7 163 aa8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.06
CDK5RAP3-231ENST00000584063 AMELXQ99217 191 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TENM1Q9UKZ4 2725 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 PRO1854Q9UHT4 67 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 VWFP04275 2813 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 UBE2D3P61077 147 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 UBE2D2P62837 147 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 KTN1-AS1Q86SY8 53 aa8.39□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 A0A0J9YX75 114 aa8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 LY6G6DO95868 133 aa8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 ZNF625Q96I27 306 aaPredicted RBP8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 BAHCC1Q9P281 2608 aa8.38□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TRBV27A0A0K0K1C4 114 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 PPP1R17O96001 155 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 Q6ZSN1 163 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGHV3OR16-12A0A075B7B8 117 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 CD28P10747 220 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGLV4-3A0A075B6K6 122 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 INAFM1C9JVW0 142 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 K7EQG2 157 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 SLC25A20O43772 301 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 NXPH4O95158 308 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TMEM141Q96I45 108 aa8.36□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TMEM223A0PJW6 202 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 J3QL48 77 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 DEFB131AP59861 70 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 C20orf203Q8NBC4 194 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 LINC01619G3V211 115 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 MED14OSP0DP75 135 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TEX49A0A1B0GTD5 131 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 TIMM17BO60830 172 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGHV3-33P01772 117 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 RBM3P98179 157 aaKnown RBP8.34□□□□□ -1.07
CDK5RAP3-231ENST00000584063 DAD1P61803 113 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms