RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 PLECQ15149 4684 aaKnown RBP12.36□□□□□ -0.43
NDEL1-217ENST00000583683 K7EP34 96 aa12.36□□□□□ -0.43
NDEL1-217ENST00000583683 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
NDEL1-217ENST00000583683 LYSTQ99698 3801 aa12.35□□□□□ -0.43
NDEL1-217ENST00000583683 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
NDEL1-217ENST00000583683 PRSS29PA6NIE9 313 aa12.35□□□□□ -0.43
NDEL1-217ENST00000583683 ODF1Q14990 250 aa12.34□□□□□ -0.43
NDEL1-217ENST00000583683 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
NDEL1-217ENST00000583683 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
NDEL1-217ENST00000583683 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
NDEL1-217ENST00000583683 IGHV3-30-5P0DP03 117 aa12.33□□□□□ -0.44
NDEL1-217ENST00000583683 ANGP03950 147 aaKnown RBP12.32□□□□□ -0.44
NDEL1-217ENST00000583683 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
NDEL1-217ENST00000583683 LINC01556Q5JQF7 62 aa12.32□□□□□ -0.44
NDEL1-217ENST00000583683 CASC10Q5T4H9 136 aa12.32□□□□□ -0.44
NDEL1-217ENST00000583683 UBE2DNLQ8IWF7 75 aa12.31□□□□□ -0.44
NDEL1-217ENST00000583683 LINC00269Q8N2A0 174 aa12.31□□□□□ -0.44
NDEL1-217ENST00000583683 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
NDEL1-217ENST00000583683 CHTOPQ9Y3Y2 248 aaKnown RBP12.31□□□□□ -0.44
NDEL1-217ENST00000583683 F8VRH5 84 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 HIGD1BQ9P298 99 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 H3BUT2 72 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 UBE2D1P51668 147 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 Q9H8V8 135 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 KLK12Q9UKR0 248 aa12.3□□□□□ -0.44
NDEL1-217ENST00000583683 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
NDEL1-217ENST00000583683 A0A1W2PPM0 123 aa12.29□□□□□ -0.44
NDEL1-217ENST00000583683 C3orf84H3BNL1 204 aa12.29□□□□□ -0.44
NDEL1-217ENST00000583683 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
NDEL1-217ENST00000583683 IGKV3OR2-268A0A0C4DH90 116 aa12.28□□□□□ -0.44
NDEL1-217ENST00000583683 REG3AQ06141 175 aa12.28□□□□□ -0.44
NDEL1-217ENST00000583683 PRR34Q9NV39 138 aa12.28□□□□□ -0.44
NDEL1-217ENST00000583683 A0A0J9YXV3 536 aa12.27□□□□□ -0.45
NDEL1-217ENST00000583683 PCP2Q8IVA1 136 aa12.27□□□□□ -0.45
NDEL1-217ENST00000583683 LINC00959A0A1B0GUT2 108 aa12.26□□□□□ -0.45
NDEL1-217ENST00000583683 DPM2O94777 84 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 PLNP26678 52 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 ENHOQ6UWT2 76 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 DNAH1Q9P2D7 4330 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 C11orf86A6NJI1 115 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 IGKCP01834 107 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 FAM19A3Q7Z5A8 133 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 NFE4Q86UQ8 179 aa12.25□□□□□ -0.45
NDEL1-217ENST00000583683 UBE2WQ96B02 151 aa12.24□□□□□ -0.45
NDEL1-217ENST00000583683 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
NDEL1-217ENST00000583683 SPCS1Q9Y6A9 102 aa12.24□□□□□ -0.45
NDEL1-217ENST00000583683 TINCRA0A1B0GVN0 87 aa12.23□□□□□ -0.45
NDEL1-217ENST00000583683 NMUP48645 174 aa12.23□□□□□ -0.45
NDEL1-217ENST00000583683 SMIM13P0DJ93 91 aa12.23□□□□□ -0.45
NDEL1-217ENST00000583683 COX6A2Q02221 97 aa12.23□□□□□ -0.45
NDEL1-217ENST00000583683 TMEM238C9JI98 176 aa12.22□□□□□ -0.45
NDEL1-217ENST00000583683 CRPP02741 224 aa12.22□□□□□ -0.45
NDEL1-217ENST00000583683 FABP2P12104 132 aa12.22□□□□□ -0.45
NDEL1-217ENST00000583683 SS18Q15532 418 aa12.22□□□□□ -0.45
NDEL1-217ENST00000583683 NAA38Q9BRA0 125 aaKnown RBP12.21□□□□□ -0.45
NDEL1-217ENST00000583683 IGLV10-54A0A075B6I4 117 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 IBA57-AS1B1ANH7 110 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 HERVK_113P63121 156 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 C10orf126Q8N4M7 172 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 RAB37Q96AX2 223 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 TM2D2Q9BX73 214 aa12.21□□□□□ -0.46
NDEL1-217ENST00000583683 GEMIN7Q9H840 131 aaKnown RBP12.21□□□□□ -0.46
NDEL1-217ENST00000583683 FXYD2P54710 66 aa12.2□□□□□ -0.46
NDEL1-217ENST00000583683 MIAQ16674 131 aa12.2□□□□□ -0.46
NDEL1-217ENST00000583683 KRTAP1-5Q9BYS1 174 aa12.2□□□□□ -0.46
NDEL1-217ENST00000583683 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
NDEL1-217ENST00000583683 IGLV5-45A0A087WSX0 123 aa12.19□□□□□ -0.46
NDEL1-217ENST00000583683 ZNF22P17026 224 aaPredicted RBP12.19□□□□□ -0.46
NDEL1-217ENST00000583683 XCL1P47992 114 aa12.19□□□□□ -0.46
NDEL1-217ENST00000583683 CHCHD10Q8WYQ3 142 aaPredicted RBP12.19□□□□□ -0.46
NDEL1-217ENST00000583683 CDKN2A-AS1Q9UH64 79 aa12.19□□□□□ -0.46
NDEL1-217ENST00000583683 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
NDEL1-217ENST00000583683 TMEM170BQ5T4T1 132 aa12.18□□□□□ -0.46
NDEL1-217ENST00000583683 IGHV3OR16-9A0A0B4J2B5 98 aa12.18□□□□□ -0.46
NDEL1-217ENST00000583683 TAL2Q16559 108 aa12.18□□□□□ -0.46
NDEL1-217ENST00000583683 GCSHP23434 173 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 CD164L2Q6UWJ8 174 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 CEND1Q8N111 149 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 LINC00476Q8WZB0 136 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 E9PLD3 99 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 Q9HAA7 133 aa12.16□□□□□ -0.46
NDEL1-217ENST00000583683 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
NDEL1-217ENST00000583683 LY6G6CO95867 125 aa12.14□□□□□ -0.47
NDEL1-217ENST00000583683 KRTAP26-1Q6PEX3 210 aa12.14□□□□□ -0.47
NDEL1-217ENST00000583683 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
NDEL1-217ENST00000583683 FOXI1Q12951 378 aa12.14□□□□□ -0.47
NDEL1-217ENST00000583683 C1orf43Q9BWL3 253 aa12.14□□□□□ -0.47
NDEL1-217ENST00000583683 GAGE12HA6NDE8 117 aa12.13□□□□□ -0.47
NDEL1-217ENST00000583683 SCGB1A1P11684 91 aa12.13□□□□□ -0.47
NDEL1-217ENST00000583683 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
NDEL1-217ENST00000583683 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
NDEL1-217ENST00000583683 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
NDEL1-217ENST00000583683 IGKV2D-24A0A075B6R9 120 aa12.12□□□□□ -0.47
NDEL1-217ENST00000583683 A0A087WZ39 114 aa12.12□□□□□ -0.47
NDEL1-217ENST00000583683 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
NDEL1-217ENST00000583683 K7ERJ3 54 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms