RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 TP73-AS1Q9UF72 201 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 TMEM223A0PJW6 202 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 HERVK_113P63121 156 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 FAM19A3Q7Z5A8 133 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 PCP2Q8IVA1 136 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 LINC00469Q8N7U9 141 aa8.6□□□□□ -1.03
SRSF1-204ENST00000581979 BOD1L2Q8IYS8 172 aa8.59□□□□□ -1.03
SRSF1-204ENST00000581979 ANGP03950 147 aaKnown RBP8.58□□□□□ -1.04
SRSF1-204ENST00000581979 ESRGQ1W209 222 aa8.58□□□□□ -1.04
SRSF1-204ENST00000581979 DNAH6Q9C0G6 4158 aa8.58□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 H3BRM9 83 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 COX6A2Q02221 97 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 DNAH10Q8IVF4 4471 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 DLEU1O43261 78 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 CLPSL2Q6UWE3 100 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 Q8N3U1 123 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
SRSF1-204ENST00000581979 IGLV5-45A0A087WSX0 123 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 LINC00959A0A1B0GUT2 108 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 LEPROTO15243 131 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 SS18Q15532 418 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 MAPKAPK5-AS1Q8N8E1 139 aa8.56□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV3-33P01772 117 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV3-30-3P0DP02 117 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 LGALS3P17931 250 aaKnown RBP8.55□□□□□ -1.04
SRSF1-204ENST00000581979 CTAG1AP78358 180 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 PLEKHB2Q96CS7 222 aa8.55□□□□□ -1.04
SRSF1-204ENST00000581979 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 MYMXA0A1B0GTQ4 84 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 REG3AQ06141 175 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
SRSF1-204ENST00000581979 TRAV8-3A0A0A6YYJ7 113 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 J3QQQ9 107 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
SRSF1-204ENST00000581979 SIVA1O15304 175 aa8.53□□□□□ -1.04
SRSF1-204ENST00000581979 CCL25O15444 150 aa8.53□□□□□ -1.04
SRSF1-204ENST00000581979 TSPEAR-AS2P59090 65 aa8.53□□□□□ -1.04
SRSF1-204ENST00000581979 C2orf91Q6ZV80 131 aa8.53□□□□□ -1.04
SRSF1-204ENST00000581979 XCL1P47992 114 aa8.52□□□□□ -1.05
SRSF1-204ENST00000581979 CCL18P55774 89 aa8.52□□□□□ -1.05
SRSF1-204ENST00000581979 CRPP02741 224 aa8.51□□□□□ -1.05
SRSF1-204ENST00000581979 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
SRSF1-204ENST00000581979 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
SRSF1-204ENST00000581979 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 IGHV3OR16-9A0A0B4J2B5 98 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 M0R143 59 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 SCGB1D4Q6XE38 83 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
SRSF1-204ENST00000581979 BATFQ16520 125 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 LINC00336Q6ZUF6 198 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 C5orf38Q86SI9 138 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
SRSF1-204ENST00000581979 PRR34Q9NV39 138 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 A0A087WZ39 114 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 HINT1P49773 126 aaPredicted RBP8.49□□□□□ -1.05
SRSF1-204ENST00000581979 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 UBE2WQ96B02 151 aa8.49□□□□□ -1.05
SRSF1-204ENST00000581979 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
SRSF1-204ENST00000581979 SNHG12Q9BXW3 62 aa8.48□□□□□ -1.05
SRSF1-204ENST00000581979 EREGO14944 169 aa8.47□□□□□ -1.05
SRSF1-204ENST00000581979 DNAH10OSP0CZ25 163 aa8.47□□□□□ -1.05
SRSF1-204ENST00000581979 HSD52Q0P140 79 aa8.47□□□□□ -1.05
SRSF1-204ENST00000581979 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
SRSF1-204ENST00000581979 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
SRSF1-204ENST00000581979 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.05
SRSF1-204ENST00000581979 TOMM7Q9P0U1 55 aa8.46□□□□□ -1.05
SRSF1-204ENST00000581979 TRAV8-4A0A0B4J246 113 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 COX7A2LO14548 114 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 MIAQ16674 131 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 Q6ZR54 194 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 COX7B2Q8TF08 81 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 UPK3BQ9BT76 320 aa8.46□□□□□ -1.06
SRSF1-204ENST00000581979 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
SRSF1-204ENST00000581979 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
SRSF1-204ENST00000581979 RTL8CO15255 209 aa8.45□□□□□ -1.06
SRSF1-204ENST00000581979 MALP21145 153 aa8.45□□□□□ -1.06
SRSF1-204ENST00000581979 FOXI1Q12951 378 aa8.45□□□□□ -1.06
SRSF1-204ENST00000581979 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 M0R2N4 97 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 NDUFA1O15239 70 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 BVES-AS1Q5T3Y7 98 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 C10orf126Q8N4M7 172 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 HIST1H4GQ99525 98 aa8.44□□□□□ -1.06
SRSF1-204ENST00000581979 TAL2Q16559 108 aa8.43□□□□□ -1.06
SRSF1-204ENST00000581979 Q9H8V8 135 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms