RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 CIRBP-AS1Q8TBR5 109 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
CCDC57-211ENST00000578187 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
CCDC57-211ENST00000578187 FAT1Q14517 4588 aa8.23□□□□□ -1.09
CCDC57-211ENST00000578187 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
CCDC57-211ENST00000578187 LINC01546A6NGU7 62 aa8.23□□□□□ -1.09
CCDC57-211ENST00000578187 KRTAP29-1A8MX34 341 aaPredicted RBP8.23□□□□□ -1.09
CCDC57-211ENST00000578187 SLPIP03973 132 aa8.23□□□□□ -1.09
CCDC57-211ENST00000578187 FABP9Q0Z7S8 132 aa8.23□□□□□ -1.09
CCDC57-211ENST00000578187 NPSP0C0P6 89 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 TRAPPC1Q9Y5R8 145 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 HERC1Q15751 4861 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
CCDC57-211ENST00000578187 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.21□□□□□ -1.1
CCDC57-211ENST00000578187 IGIPA6NJ69 53 aa8.21□□□□□ -1.1
CCDC57-211ENST00000578187 IFITM10A6NMD0 228 aa8.21□□□□□ -1.1
CCDC57-211ENST00000578187 COX7A2LO14548 114 aa8.21□□□□□ -1.1
CCDC57-211ENST00000578187 G0S2P27469 103 aa8.21□□□□□ -1.1
CCDC57-211ENST00000578187 PRSS3P2Q8NHM4 247 aa8.21□□□□□ -1.1
CCDC57-211ENST00000578187 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
CCDC57-211ENST00000578187 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
CCDC57-211ENST00000578187 IGHV3OR16-9A0A0B4J2B5 98 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 RPL37AP61513 92 aaKnown RBP8.19□□□□□ -1.1
CCDC57-211ENST00000578187 Q6ZN92 141 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 C18orf32Q8TCD1 76 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 AMELXQ99217 191 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
CCDC57-211ENST00000578187 IGHV3-64A0A075B6Q5 118 aa8.18□□□□□ -1.1
CCDC57-211ENST00000578187 OXTP01178 125 aa8.18□□□□□ -1.1
CCDC57-211ENST00000578187 MALP21145 153 aa8.18□□□□□ -1.1
CCDC57-211ENST00000578187 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
CCDC57-211ENST00000578187 C2orf88Q9BSF0 95 aa8.18□□□□□ -1.1
CCDC57-211ENST00000578187 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
CCDC57-211ENST00000578187 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 UBE2D1P51668 147 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 LINC00242Q5T6M2 205 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 SERTAD4-AS1Q5TG53 156 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 ERASQ7Z444 233 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
CCDC57-211ENST00000578187 ZNF561-AS1K7EIQ3 104 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 APOMO95445 188 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 CIRBPQ14011 172 aaKnown RBP8.16□□□□□ -1.1
CCDC57-211ENST00000578187 PAPPA-AS1Q5QFB9 102 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 DPH3Q96FX2 82 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 URB1-AS1Q96HZ7 61 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 VCX2Q9H322 139 aa8.16□□□□□ -1.1
CCDC57-211ENST00000578187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
CCDC57-211ENST00000578187 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
CCDC57-211ENST00000578187 PANO1I0J062 215 aa8.15□□□□□ -1.1
CCDC57-211ENST00000578187 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
CCDC57-211ENST00000578187 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
CCDC57-211ENST00000578187 SCGB3A1Q96QR1 104 aa8.15□□□□□ -1.1
CCDC57-211ENST00000578187 A0A087WZ39 114 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 A0A096LNJ9 63 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 LINC00614P0C842 121 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 COX6A2Q02221 97 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 SPAG11BQ08648 103 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
CCDC57-211ENST00000578187 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
CCDC57-211ENST00000578187 Q6ZRU5 148 aa8.13□□□□□ -1.11
CCDC57-211ENST00000578187 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
CCDC57-211ENST00000578187 ORAOV1Q8WV07 137 aa8.13□□□□□ -1.11
CCDC57-211ENST00000578187 C2orf48Q96LS8 159 aa8.13□□□□□ -1.11
CCDC57-211ENST00000578187 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
CCDC57-211ENST00000578187 LINC01561Q8N1V8 128 aa8.12□□□□□ -1.11
CCDC57-211ENST00000578187 PKIGQ9Y2B9 76 aa8.12□□□□□ -1.11
CCDC57-211ENST00000578187 F8WDY8 70 aa8.11□□□□□ -1.11
CCDC57-211ENST00000578187 HBDP02042 147 aa8.11□□□□□ -1.11
CCDC57-211ENST00000578187 RAB5BP61020 215 aa8.11□□□□□ -1.11
CCDC57-211ENST00000578187 SEC11AP67812 179 aa8.11□□□□□ -1.11
CCDC57-211ENST00000578187 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
CCDC57-211ENST00000578187 HERVK_113P63121 156 aa8.1□□□□□ -1.11
CCDC57-211ENST00000578187 A0A096LNI7 61 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 A0A0J9YXV3 536 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 COLCA2A8K830 154 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
CCDC57-211ENST00000578187 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 PMVKQ15126 192 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
CCDC57-211ENST00000578187 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
CCDC57-211ENST00000578187 IGLV5-45A0A087WSX0 123 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 A0A087WYN8 130 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 TINCRA0A1B0GVN0 87 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 NDUFA1O15239 70 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 TRGC2P03986 189 aa8.08□□□□□ -1.12
CCDC57-211ENST00000578187 PMCHL1Q16048 86 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms