RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PRR34Q9NV39 138 aa12.62□□□□□ -0.39
PRKCA-203ENST00000578063 KLK12Q9UKR0 248 aa12.62□□□□□ -0.39
PRKCA-203ENST00000578063 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
PRKCA-203ENST00000578063 LEPROTO15243 131 aa12.61□□□□□ -0.39
PRKCA-203ENST00000578063 HNRNPA3P51991 378 aaKnown RBP12.61□□□□□ -0.39
PRKCA-203ENST00000578063 PLEKHB2Q96CS7 222 aa12.61□□□□□ -0.39
PRKCA-203ENST00000578063 APLNQ9ULZ1 77 aa12.61□□□□□ -0.39
PRKCA-203ENST00000578063 CRPP02741 224 aa12.6□□□□□ -0.39
PRKCA-203ENST00000578063 SPINK8P0C7L1 97 aa12.6□□□□□ -0.39
PRKCA-203ENST00000578063 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
PRKCA-203ENST00000578063 UPK3BQ9BT76 320 aa12.6□□□□□ -0.39
PRKCA-203ENST00000578063 IGHV3OR16-9A0A0B4J2B5 98 aa12.59□□□□□ -0.39
PRKCA-203ENST00000578063 TP73-AS1Q9UF72 201 aa12.59□□□□□ -0.39
PRKCA-203ENST00000578063 IGHV3-64A0A075B6Q5 118 aa12.59□□□□□ -0.39
PRKCA-203ENST00000578063 J3QQQ9 107 aa12.59□□□□□ -0.39
PRKCA-203ENST00000578063 LGALS3P17931 250 aaKnown RBP12.59□□□□□ -0.39
PRKCA-203ENST00000578063 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
PRKCA-203ENST00000578063 TRAV8-3A0A0A6YYJ7 113 aa12.58□□□□□ -0.4
PRKCA-203ENST00000578063 XCL1P47992 114 aa12.58□□□□□ -0.4
PRKCA-203ENST00000578063 IGLV5-39A0A0G2JS06 123 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 MYMXA0A1B0GTQ4 84 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 SMIM1B2RUZ4 78 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 SIVA1O15304 175 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 TSPEAR-AS2P59090 65 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 CHCHD10Q8WYQ3 142 aaPredicted RBP12.57□□□□□ -0.4
PRKCA-203ENST00000578063 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
PRKCA-203ENST00000578063 A0A087WZ39 114 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 LINC00587B1AMM8 73 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 CD164L2Q6UWJ8 174 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 ENHOQ6UWT2 76 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 MAPKAPK5-AS1Q8N8E1 139 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 UBE2WQ96B02 151 aa12.57□□□□□ -0.4
PRKCA-203ENST00000578063 TRAV8-4A0A0B4J246 113 aa12.56□□□□□ -0.4
PRKCA-203ENST00000578063 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
PRKCA-203ENST00000578063 MIAQ16674 131 aa12.56□□□□□ -0.4
PRKCA-203ENST00000578063 C2orf91Q6ZV80 131 aa12.55□□□□□ -0.4
PRKCA-203ENST00000578063 LINC01561Q8N1V8 128 aa12.55□□□□□ -0.4
PRKCA-203ENST00000578063 IGLV10-54A0A075B6I4 117 aa12.54□□□□□ -0.4
PRKCA-203ENST00000578063 C5orf38Q86SI9 138 aa12.54□□□□□ -0.4
PRKCA-203ENST00000578063 UBE2DNLQ8IWF7 75 aa12.53□□□□□ -0.4
PRKCA-203ENST00000578063 HIGD1BQ9P298 99 aa12.53□□□□□ -0.4
PRKCA-203ENST00000578063 COX7A2LO14548 114 aa12.52□□□□□ -0.41
PRKCA-203ENST00000578063 CTAG1AP78358 180 aa12.52□□□□□ -0.41
PRKCA-203ENST00000578063 ZFAND6Q6FIF0 208 aa12.52□□□□□ -0.41
PRKCA-203ENST00000578063 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
PRKCA-203ENST00000578063 DNAH7Q8WXX0 4024 aa12.51□□□□□ -0.41
PRKCA-203ENST00000578063 FOXI1Q12951 378 aa12.51□□□□□ -0.41
PRKCA-203ENST00000578063 Q9H8V8 135 aa12.51□□□□□ -0.41
PRKCA-203ENST00000578063 NDUFA12Q9UI09 145 aa12.51□□□□□ -0.41
PRKCA-203ENST00000578063 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
PRKCA-203ENST00000578063 K7EP13 123 aa12.5□□□□□ -0.41
PRKCA-203ENST00000578063 SCGB1D4Q6XE38 83 aa12.5□□□□□ -0.41
PRKCA-203ENST00000578063 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
PRKCA-203ENST00000578063 IBA57-AS1B1ANH7 110 aa12.48□□□□□ -0.41
PRKCA-203ENST00000578063 NDUFA1O15239 70 aa12.48□□□□□ -0.41
PRKCA-203ENST00000578063 MALP21145 153 aa12.48□□□□□ -0.41
PRKCA-203ENST00000578063 COX7B2Q8TF08 81 aa12.48□□□□□ -0.41
PRKCA-203ENST00000578063 C1orf43Q9BWL3 253 aa12.47□□□□□ -0.41
PRKCA-203ENST00000578063 WWC2-AS2Q96NR7 200 aa12.46□□□□□ -0.41
PRKCA-203ENST00000578063 HSD52Q0P140 79 aa12.45□□□□□ -0.42
PRKCA-203ENST00000578063 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
PRKCA-203ENST00000578063 TGP01266 2768 aa12.45□□□□□ -0.42
PRKCA-203ENST00000578063 APOMO95445 188 aa12.45□□□□□ -0.42
PRKCA-203ENST00000578063 A0A0J9YXY3 114 aa12.44□□□□□ -0.42
PRKCA-203ENST00000578063 M0R143 59 aa12.44□□□□□ -0.42
PRKCA-203ENST00000578063 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
PRKCA-203ENST00000578063 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
PRKCA-203ENST00000578063 Q8IZM0 81 aa12.44□□□□□ -0.42
PRKCA-203ENST00000578063 PRSS2P07478 247 aa12.43□□□□□ -0.42
PRKCA-203ENST00000578063 ORAOV1Q8WV07 137 aa12.43□□□□□ -0.42
PRKCA-203ENST00000578063 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
PRKCA-203ENST00000578063 CSMD3Q7Z407 3707 aa12.43□□□□□ -0.42
PRKCA-203ENST00000578063 IGKV2D-24A0A075B6R9 120 aa12.42□□□□□ -0.42
PRKCA-203ENST00000578063 HERV-K104P63124 156 aa12.42□□□□□ -0.42
PRKCA-203ENST00000578063 TAL2Q16559 108 aa12.42□□□□□ -0.42
PRKCA-203ENST00000578063 RMI2Q96E14 147 aa12.42□□□□□ -0.42
PRKCA-203ENST00000578063 Q9HAA7 133 aa12.42□□□□□ -0.42
PRKCA-203ENST00000578063 TMEM238C9JI98 176 aa12.41□□□□□ -0.42
PRKCA-203ENST00000578063 HINT1P49773 126 aaPredicted RBP12.41□□□□□ -0.42
PRKCA-203ENST00000578063 C6orf226Q5I0X4 101 aa12.41□□□□□ -0.42
PRKCA-203ENST00000578063 SNHG12Q9BXW3 62 aa12.41□□□□□ -0.42
PRKCA-203ENST00000578063 SPANXB1Q9NS25 103 aaPredicted RBP12.41□□□□□ -0.42
PRKCA-203ENST00000578063 PLECQ15149 4684 aaKnown RBP12.41□□□□□ -0.42
PRKCA-203ENST00000578063 STARD9Q9P2P6 4700 aa12.41□□□□□ -0.42
PRKCA-203ENST00000578063 HIST1H4GQ99525 98 aa12.4□□□□□ -0.42
PRKCA-203ENST00000578063 CXCL5P42830 114 aa12.4□□□□□ -0.43
PRKCA-203ENST00000578063 CFAP161Q6P656 301 aa12.4□□□□□ -0.43
PRKCA-203ENST00000578063 EREGO14944 169 aa12.39□□□□□ -0.43
PRKCA-203ENST00000578063 TIMM17BO60830 172 aa12.39□□□□□ -0.43
PRKCA-203ENST00000578063 BVES-AS1Q5T3Y7 98 aa12.39□□□□□ -0.43
PRKCA-203ENST00000578063 SPAG11BQ08648 103 aa12.38□□□□□ -0.43
PRKCA-203ENST00000578063 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
PRKCA-203ENST00000578063 KIAA0087Q14695 138 aa12.38□□□□□ -0.43
PRKCA-203ENST00000578063 BATFQ16520 125 aa12.38□□□□□ -0.43
PRKCA-203ENST00000578063 TTC32Q5I0X7 151 aa12.38□□□□□ -0.43
PRKCA-203ENST00000578063 CIRBPQ14011 172 aaKnown RBP12.37□□□□□ -0.43
PRKCA-203ENST00000578063 COX11Q9Y6N1 276 aa12.37□□□□□ -0.43
PRKCA-203ENST00000578063 CKS1BP61024 79 aa12.37□□□□□ -0.43
PRKCA-203ENST00000578063 LITAFQ99732 161 aa12.37□□□□□ -0.43
PRKCA-203ENST00000578063 TENM2Q9NT68 2774 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms