RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 ICOSQ9Y6W8 199 aa14.65□□□□□ -0.06
SRRM2-229ENST00000576894 TRAV13-1A0A0B4J241 112 aa14.65□□□□□ -0.06
SRRM2-229ENST00000576894 NPC2P61916 151 aa14.65□□□□□ -0.06
SRRM2-229ENST00000576894 CIRBPQ14011 172 aaKnown RBP14.65□□□□□ -0.06
SRRM2-229ENST00000576894 Q9H8V8 135 aa14.65□□□□□ -0.06
SRRM2-229ENST00000576894 LINC01620Q4KN68 170 aa14.64□□□□□ -0.07
SRRM2-229ENST00000576894 F5H768 121 aa14.64□□□□□ -0.07
SRRM2-229ENST00000576894 H7C423 109 aa14.64□□□□□ -0.07
SRRM2-229ENST00000576894 FASNP49327 2511 aaKnown RBP14.63□□□□□ -0.07
SRRM2-229ENST00000576894 J3QKU1 62 aa14.62□□□□□ -0.07
SRRM2-229ENST00000576894 LOC100131303A0A0U1RQF7 123 aa14.62□□□□□ -0.07
SRRM2-229ENST00000576894 UBE2L6O14933 153 aa14.62□□□□□ -0.07
SRRM2-229ENST00000576894 DAND5Q8N907 189 aa14.62□□□□□ -0.07
SRRM2-229ENST00000576894 KMT2BQ9UMN6 2715 aaPredicted RBP14.62□□□□□ -0.07
SRRM2-229ENST00000576894 C2CD3Q4AC94 2353 aa14.61□□□□□ -0.07
SRRM2-229ENST00000576894 ZNF625Q96I27 306 aaPredicted RBP14.61□□□□□ -0.07
SRRM2-229ENST00000576894 LINC00308Q8TCZ7 52 aa14.61□□□□□ -0.07
SRRM2-229ENST00000576894 TRGV4A0A0C4DH28 118 aa14.6□□□□□ -0.07
SRRM2-229ENST00000576894 TRBV10-2A0A0K0K1G8 114 aa14.59□□□□□ -0.07
SRRM2-229ENST00000576894 COX6CP09669 75 aa14.59□□□□□ -0.07
SRRM2-229ENST00000576894 FHL2Q14192 279 aa14.59□□□□□ -0.07
SRRM2-229ENST00000576894 RPL13AP40429 203 aaKnown RBP14.58□□□□□ -0.07
SRRM2-229ENST00000576894 TRAV26-1A0A087WT03 109 aa14.58□□□□□ -0.08
SRRM2-229ENST00000576894 HERV-K104P63124 156 aa14.57□□□□□ -0.08
SRRM2-229ENST00000576894 COPS9Q8WXC6 57 aa14.57□□□□□ -0.08
SRRM2-229ENST00000576894 KRTAP10-3P60369 221 aa14.56□□□□□ -0.08
SRRM2-229ENST00000576894 PRIMA1Q86XR5 153 aa14.56□□□□□ -0.08
SRRM2-229ENST00000576894 PPDPFQ9H3Y8 114 aa14.55□□□□□ -0.08
SRRM2-229ENST00000576894 SOSTDC1Q6X4U4 206 aa14.54□□□□□ -0.08
SRRM2-229ENST00000576894 HECTD1Q9ULT8 2610 aa14.54□□□□□ -0.08
SRRM2-229ENST00000576894 TRBV6-8A0A0A6YYG3 113 aa14.54□□□□□ -0.08
SRRM2-229ENST00000576894 TMEM262E9PQX1 116 aa14.54□□□□□ -0.08
SRRM2-229ENST00000576894 HIVEP2P31629 2446 aa14.54□□□□□ -0.08
SRRM2-229ENST00000576894 LST1O00453 97 aa14.53□□□□□ -0.08
SRRM2-229ENST00000576894 NTN5Q8WTR8 489 aaPredicted RBP14.53□□□□□ -0.08
SRRM2-229ENST00000576894 GAGE6Q13070 117 aa14.53□□□□□ -0.08
SRRM2-229ENST00000576894 LINC00612Q8N6U2 182 aa14.53□□□□□ -0.08
SRRM2-229ENST00000576894 LINC00482Q8N8I6 264 aa14.53□□□□□ -0.08
SRRM2-229ENST00000576894 KIR2DL5BQ8NHK3 375 aa14.53□□□□□ -0.08
SRRM2-229ENST00000576894 MEIG1Q5JSS6 88 aa14.52□□□□□ -0.08
SRRM2-229ENST00000576894 GCN1Q92616 2671 aaKnown RBP14.52□□□□□ -0.09
SRRM2-229ENST00000576894 A0A0U1RRA0 63 aa14.51□□□□□ -0.09
SRRM2-229ENST00000576894 CLEC2BQ92478 149 aa14.51□□□□□ -0.09
SRRM2-229ENST00000576894 NOTCH2Q04721 2471 aa14.51□□□□□ -0.09
SRRM2-229ENST00000576894 H3BT86 120 aa14.5□□□□□ -0.09
SRRM2-229ENST00000576894 IGLV4-60A0A075B6I1 120 aa14.5□□□□□ -0.09
SRRM2-229ENST00000576894 PF4P02776 101 aa14.5□□□□□ -0.09
SRRM2-229ENST00000576894 C2orf82Q6UX34 121 aa14.49□□□□□ -0.09
SRRM2-229ENST00000576894 VWFP04275 2813 aa14.49□□□□□ -0.09
SRRM2-229ENST00000576894 CITED1Q99966 193 aa14.49□□□□□ -0.09
SRRM2-229ENST00000576894 COX7B2Q8TF08 81 aa14.48□□□□□ -0.09
SRRM2-229ENST00000576894 CRLF1O75462 422 aa14.47□□□□□ -0.09
SRRM2-229ENST00000576894 SHISA2Q6UWI4 295 aa14.47□□□□□ -0.09
SRRM2-229ENST00000576894 CHCHD5Q9BSY4 110 aa14.47□□□□□ -0.09
SRRM2-229ENST00000576894 IGHV3OR16-9A0A0B4J2B5 98 aa14.46□□□□□ -0.1
SRRM2-229ENST00000576894 TEX49A0A1B0GTD5 131 aa14.46□□□□□ -0.1
SRRM2-229ENST00000576894 UBE2WQ96B02 151 aa14.46□□□□□ -0.1
SRRM2-229ENST00000576894 OTOGQ6ZRI0 2925 aa14.46□□□□□ -0.1
SRRM2-229ENST00000576894 DEFB130BP0DP73 79 aa14.45□□□□□ -0.1
SRRM2-229ENST00000576894 DEFB130AP0DP74 79 aa14.45□□□□□ -0.1
SRRM2-229ENST00000576894 LY6G6DO95868 133 aa14.45□□□□□ -0.1
SRRM2-229ENST00000576894 SPATA3Q8NHX4 192 aa14.45□□□□□ -0.1
SRRM2-229ENST00000576894 X6R8D5 127 aa14.45□□□□□ -0.1
SRRM2-229ENST00000576894 COX7A2LO14548 114 aa14.44□□□□□ -0.1
SRRM2-229ENST00000576894 ANAPC13Q9BS18 74 aa14.44□□□□□ -0.1
SRRM2-229ENST00000576894 FN1P02751 2386 aaKnown RBP14.44□□□□□ -0.1
SRRM2-229ENST00000576894 NBEAL2Q6ZNJ1 2754 aa14.44□□□□□ -0.1
SRRM2-229ENST00000576894 SMIM9A6NGZ8 99 aa14.43□□□□□ -0.1
SRRM2-229ENST00000576894 IGKV3OR2-268A0A0C4DH90 116 aa14.43□□□□□ -0.1
SRRM2-229ENST00000576894 A0A087WZ39 114 aa14.42□□□□□ -0.1
SRRM2-229ENST00000576894 GYPEP15421 78 aa14.41□□□□□ -0.1
SRRM2-229ENST00000576894 SNCGO76070 127 aa14.4□□□□□ -0.1
SRRM2-229ENST00000576894 DEFB121Q5J5C9 76 aa14.4□□□□□ -0.1
SRRM2-229ENST00000576894 TOMM7Q9P0U1 55 aa14.4□□□□□ -0.1
SRRM2-229ENST00000576894 LINC00959A0A1B0GUT2 108 aa14.39□□□□□ -0.11
SRRM2-229ENST00000576894 MIR7-3HGQ8N6C7 128 aa14.39□□□□□ -0.11
SRRM2-229ENST00000576894 TRAV8-4A0A0B4J246 113 aa14.38□□□□□ -0.11
SRRM2-229ENST00000576894 FAM222AQ5U5X8 452 aa14.38□□□□□ -0.11
SRRM2-229ENST00000576894 A0A1B0GUV1 79 aa14.38□□□□□ -0.11
SRRM2-229ENST00000576894 PRO0255Q9UI72 69 aa14.38□□□□□ -0.11
SRRM2-229ENST00000576894 TENM1Q9UKZ4 2725 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 TRAV13-2A0A0B4J235 113 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 NHLRC4P0CG21 123 aaPredicted RBP14.37□□□□□ -0.11
SRRM2-229ENST00000576894 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 GAGE2EQ4V326 116 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 C9orf66Q5T8R8 295 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 GAGE2DQ9UEU5 116 aa14.37□□□□□ -0.11
SRRM2-229ENST00000576894 IBA57-AS1B1ANH7 110 aa14.36□□□□□ -0.11
SRRM2-229ENST00000576894 INAFM1C9JVW0 142 aa14.35□□□□□ -0.11
SRRM2-229ENST00000576894 C5orf38Q86SI9 138 aa14.35□□□□□ -0.11
SRRM2-229ENST00000576894 LYRM9A8MSI8 78 aa14.35□□□□□ -0.11
SRRM2-229ENST00000576894 TRACP01848 142 aa14.34□□□□□ -0.11
SRRM2-229ENST00000576894 IGKV2-28A0A075B6P5 120 aa14.34□□□□□ -0.11
SRRM2-229ENST00000576894 IGKV2D-28P01615 120 aa14.34□□□□□ -0.11
SRRM2-229ENST00000576894 LINC00158P58513 81 aa14.34□□□□□ -0.11
SRRM2-229ENST00000576894 SND1-IT1Q9HBX3 110 aa14.34□□□□□ -0.11
SRRM2-229ENST00000576894 TRRAPQ9Y4A5 3859 aa14.33□□□□□ -0.11
SRRM2-229ENST00000576894 RPL28P46779 137 aaKnown RBP14.33□□□□□ -0.12
SRRM2-229ENST00000576894 NDUFV3P56181 108 aaKnown RBP14.33□□□□□ -0.12
SRRM2-229ENST00000576894 CRPP02741 224 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms