RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 VPS8Q8N3P4 1428 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 TLN1Q9Y490 2541 aaKnown RBP1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 CEP290O15078 2479 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 NPVFQ9HCQ7 196 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 MANBALQ9NQG1 85 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 KIF21BO75037 1637 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 ATRQ13535 2644 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 NCOR1O75376 2440 aa1.75□□□□□ -2.13
CALCOCO2-226ENST00000575461 CFAP54Q96N23 3096 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 FLNCQ14315 2725 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 UNC13BO14795 1591 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 S100A10P60903 97 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 Q0VG73 95 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 KRTAP19-3Q7Z4W3 81 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 UBE2DNLQ8IWF7 75 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 KRTAP4-1Q9BYQ7 146 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 LINC01558Q9Y6Z2 57 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 USP34Q70CQ2 3546 aa1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 CNOT1A5YKK6 2376 aaKnown RBP1.74□□□□□ -2.13
CALCOCO2-226ENST00000575461 DIP2BQ9P265 1576 aa1.73□□□□□ -2.13
CALCOCO2-226ENST00000575461 ABCC10Q5T3U5 1492 aa1.73□□□□□ -2.13
CALCOCO2-226ENST00000575461 TENM4Q6N022 2769 aa1.73□□□□□ -2.13
CALCOCO2-226ENST00000575461 MADDQ8WXG6 1647 aa1.73□□□□□ -2.13
CALCOCO2-226ENST00000575461 RB1CC1Q8TDY2 1594 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 PPRC1Q5VV67 1664 aaKnown RBP1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 CFAP43Q8NDM7 1665 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 TRAV22A0A0B4J277 110 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 S100A8P05109 93 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 UBE2D3P61077 147 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 UBE2D2P62837 147 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 GVINP1Q7Z2Y8 2422 aa1.72□□□□□ -2.13
CALCOCO2-226ENST00000575461 PIEZO2Q9H5I5 2752 aa1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 ASPMQ8IZT6 3477 aa1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 KIF21AQ7Z4S6 1674 aa1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 COX6CP09669 75 aa1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 BOD1L1Q8NFC6 3051 aa1.71□□□□□ -2.14
CALCOCO2-226ENST00000575461 PKD1L1Q8TDX9 2849 aa1.7□□□□□ -2.14
CALCOCO2-226ENST00000575461 LRRC37A2A6NM11 1700 aa1.7□□□□□ -2.14
CALCOCO2-226ENST00000575461 SFT2D2O95562 160 aa1.7□□□□□ -2.14
CALCOCO2-226ENST00000575461 PRO1854Q9UHT4 67 aa1.7□□□□□ -2.14
CALCOCO2-226ENST00000575461 TOPAZ1Q8N9V7 1692 aa1.7□□□□□ -2.14
CALCOCO2-226ENST00000575461 PCNX1Q96RV3 2341 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 ABCC5O15440 1437 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 CSMD1Q96PZ7 3565 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 CRYM-AS1A6NIL9 109 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 M0R143 59 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 DCHS1Q96JQ0 3298 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 CHD1O14646 1710 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 ABCA3Q99758 1704 aa1.69□□□□□ -2.14
CALCOCO2-226ENST00000575461 CREBBPQ92793 2442 aa1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 NXT2Q9NPJ8 142 aaKnown RBP1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 C5orf42Q9H799 3197 aa1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 GAPVD1Q14C86 1478 aa1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 HTTP42858 3142 aa1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 CENPFP49454 3210 aa1.68□□□□□ -2.14
CALCOCO2-226ENST00000575461 RYR2Q92736 4967 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 hADV29S1A0JD25 119 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 AP4S1Q9Y587 144 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 ZNF236Q9UL36 1845 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 CADP27708 2225 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 ZFHX3Q15911 3703 aa1.67□□□□□ -2.14
CALCOCO2-226ENST00000575461 LRP6O75581 1613 aa1.66□□□□□ -2.14
CALCOCO2-226ENST00000575461 KMT2CQ8NEZ4 4911 aaKnown RBP1.66□□□□□ -2.14
CALCOCO2-226ENST00000575461 PDZD2O15018 2839 aa1.66□□□□□ -2.14
CALCOCO2-226ENST00000575461 KCPQ6ZWJ8 1503 aa1.66□□□□□ -2.14
CALCOCO2-226ENST00000575461 ARHGEF5Q12774 1597 aa1.65□□□□□ -2.15
CALCOCO2-226ENST00000575461 DIP2CQ9Y2E4 1556 aa1.65□□□□□ -2.15
CALCOCO2-226ENST00000575461 CCNB3Q8WWL7 1395 aa1.65□□□□□ -2.15
CALCOCO2-226ENST00000575461 COX6A2Q02221 97 aa1.65□□□□□ -2.15
CALCOCO2-226ENST00000575461 MYO7AQ13402 2215 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 KDM5AP29375 1690 aaKnown RBP1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 ZNF469Q96JG9 3925 aaPredicted RBP1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 CEP295Q9C0D2 2601 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 TRAPPC2P0DI81 140 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 TRAPPC2BP0DI82 140 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 SEC11AP67812 179 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 NCMAPQ5T1S8 102 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 KIAA0556O60303 1618 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 EHBP1L1Q8N3D4 1523 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 ABCA13Q86UQ4 5058 aa1.64□□□□□ -2.15
CALCOCO2-226ENST00000575461 GNGT2O14610 69 aa1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 SSBP3-AS1Q7Z2R9 100 aa1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 LINC00472Q9H8W2 130 aa1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 FAIMQ9NVQ4 179 aa1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 PTPRZ1P23471 2315 aaPredicted RBP1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 NWD1Q149M9 1564 aa1.63□□□□□ -2.15
CALCOCO2-226ENST00000575461 UTP20O75691 2785 aaKnown RBP1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 SBF2Q86WG5 1849 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 ZNF815PA8K554 130 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 MPC2O95563 127 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 MGPP08493 103 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 LINC00032P0C843 101 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 ARL2-SNX15V9GYD0 113 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 TEX14Q8IWB6 1497 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 HERC1Q15751 4861 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 ZANQ9Y493 2812 aa1.62□□□□□ -2.15
CALCOCO2-226ENST00000575461 EP300Q09472 2414 aaPredicted RBP1.61□□□□□ -2.15
CALCOCO2-226ENST00000575461 CUX1P39880 1505 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms