RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 DEFB130AP0DP74 79 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 Q9H8V8 135 aa11.44□□□□□ -0.58
POLR2A-201ENST00000572844 TRBV30A0A0K0K1B3 111 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 HERV-K104P63124 156 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 PPDPFQ9H3Y8 114 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 C2CD3Q4AC94 2353 aa11.43□□□□□ -0.58
POLR2A-201ENST00000572844 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-201ENST00000572844 APOC4P55056 127 aa11.42□□□□□ -0.58
POLR2A-201ENST00000572844 ZNF625Q96I27 306 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-201ENST00000572844 GAGE6Q13070 117 aa11.42□□□□□ -0.58
POLR2A-201ENST00000572844 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.585e-7■■□□□ 13.4
POLR2A-201ENST00000572844 NSD1Q96L73 2696 aaPredicted RBP11.41□□□□□ -0.58
POLR2A-201ENST00000572844 SH2D6Q7Z4S9 175 aa11.41□□□□□ -0.58
POLR2A-201ENST00000572844 PRO0255Q9UI72 69 aa11.41□□□□□ -0.58
POLR2A-201ENST00000572844 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
POLR2A-201ENST00000572844 WFDC9Q8NEX5 89 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 CHCHD5Q9BSY4 110 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 M0QXV9 152 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 WIPF1O43516 503 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 GYPEP15421 78 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 MTURNQ8N3F0 131 aa11.4□□□□□ -0.58
POLR2A-201ENST00000572844 IGLV4-60A0A075B6I1 120 aa11.39□□□□□ -0.59
POLR2A-201ENST00000572844 Q1RN00 199 aa11.39□□□□□ -0.59
POLR2A-201ENST00000572844 LINC00308Q8TCZ7 52 aa11.39□□□□□ -0.59
POLR2A-201ENST00000572844 FAM222AQ5U5X8 452 aa11.38□□□□□ -0.59
POLR2A-201ENST00000572844 A0A1B0GUV1 79 aa11.37□□□□□ -0.59
POLR2A-201ENST00000572844 H7C2G1 150 aa11.37□□□□□ -0.59
POLR2A-201ENST00000572844 PRIMA1Q86XR5 153 aa11.37□□□□□ -0.59
POLR2A-201ENST00000572844 PCP4P48539 62 aa11.37□□□□□ -0.59
POLR2A-201ENST00000572844 LINC01600Q96MT4 127 aa11.37□□□□□ -0.59
POLR2A-201ENST00000572844 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
POLR2A-201ENST00000572844 ATXN8Q156A1 80 aa11.36□□□□□ -0.59
POLR2A-201ENST00000572844 ICOSQ9Y6W8 199 aa11.36□□□□□ -0.59
POLR2A-201ENST00000572844 TRIAP1O43715 76 aa11.36□□□□□ -0.59
POLR2A-201ENST00000572844 COX7B2Q8TF08 81 aa11.36□□□□□ -0.59
POLR2A-201ENST00000572844 BAHCC1Q9P281 2608 aa11.35□□□□□ -0.59
POLR2A-201ENST00000572844 F8P00451 2351 aa11.35□□□□□ -0.59
POLR2A-201ENST00000572844 NPC2P61916 151 aa11.35□□□□□ -0.59
POLR2A-201ENST00000572844 DEFB135Q30KP9 77 aa11.35□□□□□ -0.59
POLR2A-201ENST00000572844 TEN1Q86WV5 123 aa11.35□□□□□ -0.59
POLR2A-201ENST00000572844 A0A087WZ39 114 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 MIFP14174 115 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 FOXI1Q12951 378 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 MEIG1Q5JSS6 88 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 DAND5Q8N907 189 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 PAX4O43316 350 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 COX6CP09669 75 aa11.34□□□□□ -0.59
POLR2A-201ENST00000572844 IGHV4-28A0A0C4DH34 117 aa11.33□□□□□ -0.6
POLR2A-201ENST00000572844 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
POLR2A-201ENST00000572844 PPDPFLQ8WWR9 84 aa11.32□□□□□ -0.6
POLR2A-201ENST00000572844 SLC25A20O43772 301 aa11.32□□□□□ -0.6
POLR2A-201ENST00000572844 RPL13AP40429 203 aaKnown RBP11.32□□□□□ -0.6
POLR2A-201ENST00000572844 LINC01561Q8N1V8 128 aa11.32□□□□□ -0.6
POLR2A-201ENST00000572844 Q8NAQ8 132 aa11.32□□□□□ -0.6
POLR2A-201ENST00000572844 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
POLR2A-201ENST00000572844 SOSTDC1Q6X4U4 206 aa11.31□□□□□ -0.6
POLR2A-201ENST00000572844 TRAV26-1A0A087WT03 109 aa11.31□□□□□ -0.6
POLR2A-201ENST00000572844 C9JAW5 83 aa11.31□□□□□ -0.6
POLR2A-201ENST00000572844 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
POLR2A-201ENST00000572844 DAD1P61803 113 aa11.3□□□□□ -0.6
POLR2A-201ENST00000572844 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
POLR2A-201ENST00000572844 SS18Q15532 418 aa11.29□□□□□ -0.6
POLR2A-201ENST00000572844 GAGE12HA6NDE8 117 aa11.29□□□□□ -0.6
POLR2A-201ENST00000572844 ATP5G1P05496 136 aa11.29□□□□□ -0.6
POLR2A-201ENST00000572844 TMEM262E9PQX1 116 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 TRBV10-2A0A0K0K1G8 114 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 A0A0U1RRA0 63 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 SPART-AS1P0CW21 52 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 ANKRD29Q8N6D5 301 aa11.28□□□□□ -0.6
POLR2A-201ENST00000572844 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
POLR2A-201ENST00000572844 IGHV4-30-4P0DP06 118 aa11.27□□□□□ -0.61
POLR2A-201ENST00000572844 CYSRT1A8MQ03 144 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 LST1O00453 97 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 DEFB4AO15263 64 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 SHISA2Q6UWI4 295 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 TOMM7Q9P0U1 55 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 C5orf38Q86SI9 138 aa11.26□□□□□ -0.61
POLR2A-201ENST00000572844 VWFP04275 2813 aa11.25□□□□□ -0.61
POLR2A-201ENST00000572844 CELA1Q9UNI1 258 aa11.25□□□□□ -0.61
POLR2A-201ENST00000572844 SIGMAR1Q99720 223 aa11.24□□□□□ -0.61
POLR2A-201ENST00000572844 H3BT86 120 aa11.24□□□□□ -0.61
POLR2A-201ENST00000572844 MIR7-3HGQ8N6C7 128 aa11.24□□□□□ -0.61
POLR2A-201ENST00000572844 TEP1Q99973 2627 aaKnown RBP11.24□□□□□ -0.61
POLR2A-201ENST00000572844 A0A096LPF7 62 aa11.23□□□□□ -0.61
POLR2A-201ENST00000572844 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
POLR2A-201ENST00000572844 Q8IZM0 81 aa11.23□□□□□ -0.61
POLR2A-201ENST00000572844 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
POLR2A-201ENST00000572844 TENM1Q9UKZ4 2725 aa11.22□□□□□ -0.61
POLR2A-201ENST00000572844 COX7A2LO14548 114 aa11.22□□□□□ -0.61
POLR2A-201ENST00000572844 XCL1P47992 114 aa11.21□□□□□ -0.61
POLR2A-201ENST00000572844 CLEC2BQ92478 149 aa11.21□□□□□ -0.61
POLR2A-201ENST00000572844 LINC00158P58513 81 aa11.21□□□□□ -0.62
POLR2A-201ENST00000572844 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.62
POLR2A-201ENST00000572844 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms