RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 IFITM10A6NMD0 228 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 KRTAP10-4P60372 401 aaPredicted RBP6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 LINC00242Q5T6M2 205 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 C10orf25Q5T742 122 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 SVBPQ8N300 66 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 LAMTOR2Q9Y2Q5 125 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 TRAPPC1Q9Y5R8 145 aa6.25□□□□□ -1.41
GTF3C1-212ENST00000570129 A0A096LNJ9 63 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 C1orf196B1AJZ1 125 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 EPM2AB3EWF7 344 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 COX7A2LO14548 114 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 SCO1O75880 301 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 SNAPINO95295 136 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 Q6ZRU5 148 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
GTF3C1-212ENST00000570129 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 LINC01546A6NGU7 62 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 UBE2D1P51668 147 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 CFAP161Q6P656 301 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 TMEM18Q96B42 140 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 TOMM6Q96B49 74 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 AMELXQ99217 191 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 NXT2Q9NPJ8 142 aaKnown RBP6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 CYSLTR1Q9Y271 337 aa6.23□□□□□ -1.41
GTF3C1-212ENST00000570129 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 A0A096LNI7 61 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
GTF3C1-212ENST00000570129 MYCBP2O75592 4640 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 A0A087WYN8 130 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 EIF4EBP3O60516 100 aaPredicted RBP6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 INAFM2P0DMQ5 153 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 MALP21145 153 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 KIAA0087Q14695 138 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 NDUFA5Q16718 116 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 ORMDL2Q53FV1 153 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 C2orf82Q6UX34 121 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 ORAOV1Q8WV07 137 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 SCGB3A1Q96QR1 104 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 VCX2Q9H322 139 aa6.21□□□□□ -1.42
GTF3C1-212ENST00000570129 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
GTF3C1-212ENST00000570129 FA2HQ7L5A8 372 aa6.2□□□□□ -1.42
GTF3C1-212ENST00000570129 SPACA4Q8TDM5 124 aa6.2□□□□□ -1.42
GTF3C1-212ENST00000570129 DPH3Q96FX2 82 aa6.2□□□□□ -1.42
GTF3C1-212ENST00000570129 A0A1W2PNN7 141 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 COLCA2A8K830 154 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 ZNF561-AS1K7EIQ3 104 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 NUPR1O60356 82 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 MT-ND6P03923 174 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 SPAG11BQ08648 103 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 C9orf116Q5BN46 136 aaPredicted RBP6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 CARD19Q96LW7 228 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 SMCO4Q9NRQ5 59 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 CDKN2A-AS1Q9UH64 79 aa6.19□□□□□ -1.42
GTF3C1-212ENST00000570129 A0A087WZ39 114 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 TRGC2P03986 189 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 LINC00614P0C842 121 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 LINC00310P59036 64 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 SMAGPQ0VAQ4 97 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 COX19Q49B96 90 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 ERASQ7Z444 233 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 CST9LQ9H4G1 147 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
GTF3C1-212ENST00000570129 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
GTF3C1-212ENST00000570129 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
GTF3C1-212ENST00000570129 CAMK2N2Q96S95 79 aa6.17□□□□□ -1.42
GTF3C1-212ENST00000570129 TIMM17AQ99595 171 aa6.17□□□□□ -1.42
GTF3C1-212ENST00000570129 LRP1Q07954 4544 aaKnown RBP6.17□□□□□ -1.42
GTF3C1-212ENST00000570129 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 K7EMI3 77 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 PDZD11Q5EBL8 140 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 FAM19A2Q8N3H0 131 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 STPG4Q8N801 248 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 PLAC8Q9NZF1 115 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 PKHD1L1Q86WI1 4243 aa6.16□□□□□ -1.42
GTF3C1-212ENST00000570129 SPINK8P0C7L1 97 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 NDUFA6P56556 154 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 Q6ZN92 141 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 FAM19A3Q7Z5A8 133 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 C2orf48Q96LS8 159 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 TOMM7Q9P0U1 55 aa6.15□□□□□ -1.42
GTF3C1-212ENST00000570129 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
GTF3C1-212ENST00000570129 Q6ZRP5 223 aa6.14□□□□□ -1.43
GTF3C1-212ENST00000570129 OR10D4PQ8NGN7 298 aa6.14□□□□□ -1.43
GTF3C1-212ENST00000570129 C2orf88Q9BSF0 95 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms