RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 SMIM15Q7Z3B0 74 aa5.33□□□□□ -1.56
KARS-209ENST00000568378 MRPL55Q7Z7F7 128 aaKnown RBP5.33□□□□□ -1.56
KARS-209ENST00000568378 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
KARS-209ENST00000568378 SSNA1O43805 119 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 Q6ZUT4 128 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 C3orf22Q8N5N4 141 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 LINC00469Q8N7U9 141 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 FAM210AQ96ND0 272 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 MARVELD1Q9BSK0 173 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 RNASE7Q9H1E1 156 aaKnown RBP5.32□□□□□ -1.56
KARS-209ENST00000568378 ST20Q9HBF5 79 aa5.32□□□□□ -1.56
KARS-209ENST00000568378 IGLV8-61A0A075B6I0 122 aa5.31□□□□□ -1.56
KARS-209ENST00000568378 RPL37AP8A6NKH3 93 aa5.31□□□□□ -1.56
KARS-209ENST00000568378 FOXA3P55318 350 aaPredicted RBP5.31□□□□□ -1.56
KARS-209ENST00000568378 TMUB2Q71RG4 321 aa5.31□□□□□ -1.56
KARS-209ENST00000568378 ENKURQ8TC29 256 aa5.31□□□□□ -1.56
KARS-209ENST00000568378 CSDC2Q9Y534 153 aaKnown RBP5.31□□□□□ -1.56
KARS-209ENST00000568378 TRBV6-5A0A0K0K1A5 114 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 TNFRSF6BO95407 300 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 FCER1GP30273 86 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 RPL35P42766 123 aaKnown RBP5.3□□□□□ -1.56
KARS-209ENST00000568378 C2orf82Q6UX34 121 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 C9orf62Q8N4C0 152 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 KIR2DL4Q99706 377 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 TP73-AS1Q9UF72 201 aa5.3□□□□□ -1.56
KARS-209ENST00000568378 MACF1Q9UPN3 7388 aaKnown RBP5.3□□□□□ -1.56
KARS-209ENST00000568378 BORCS7-ASMTA0A0B4J1R7 106 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 RAB19A4D1S5 217 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 H3BS24 57 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 RPL7L1Q6DKI1 246 aaKnown RBP5.29□□□□□ -1.56
KARS-209ENST00000568378 COX6B2Q6YFQ2 88 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 KRTAP13-1Q8IUC0 172 aa5.29□□□□□ -1.56
KARS-209ENST00000568378 GAGE10A6NGK3 116 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 UPK1BO75841 260 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 KIAA0087Q14695 138 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 PCOTHQ58A44 107 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 CENPWQ5EE01 88 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 LINC00167Q96N53 147 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
KARS-209ENST00000568378 TGIF2-C20orf24A0A0A6YYL0 155 aa5.27□□□□□ -1.57
KARS-209ENST00000568378 A0A1B0GV50 99 aa5.27□□□□□ -1.57
KARS-209ENST00000568378 TRBV27A0A0K0K1C4 114 aa5.26□□□□□ -1.57
KARS-209ENST00000568378 POLR2KP53803 58 aaKnown RBP5.26□□□□□ -1.57
KARS-209ENST00000568378 TMEM18Q96B42 140 aa5.26□□□□□ -1.57
KARS-209ENST00000568378 IFITM10A6NMD0 228 aa5.25□□□□□ -1.57
KARS-209ENST00000568378 KRTAP4-16G5E9R7 235 aaPredicted RBP5.25□□□□□ -1.57
KARS-209ENST00000568378 PRLHP81277 87 aa5.25□□□□□ -1.57
KARS-209ENST00000568378 FAM19A2Q8N3H0 131 aa5.25□□□□□ -1.57
KARS-209ENST00000568378 Q8NBF4 154 aa5.25□□□□□ -1.57
KARS-209ENST00000568378 VCYO14598 125 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 SPINK1P00995 79 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 GNG4P50150 75 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 CKS1BP61024 79 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 RPL32P62910 135 aaKnown RBP5.24□□□□□ -1.57
KARS-209ENST00000568378 PNRC1Q12796 327 aaPredicted RBP5.24□□□□□ -1.57
KARS-209ENST00000568378 KCNRGQ8N5I3 272 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 SFT2D1Q8WV19 159 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 TIMM21Q9BVV7 248 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
KARS-209ENST00000568378 PRSS2P07478 247 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 CFC1P0CG37 223 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 HBBP68871 147 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 FAM19A1Q7Z5A9 133 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 KRTAP9-9Q9BYP9 154 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
KARS-209ENST00000568378 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
KARS-209ENST00000568378 PLEKHB2Q96CS7 222 aa5.22□□□□□ -1.57
KARS-209ENST00000568378 SMIM12Q96EX1 92 aa5.22□□□□□ -1.57
KARS-209ENST00000568378 IGKV2-28A0A075B6P5 120 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 IGKV2D-28P01615 120 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 NKAPP1Q8N9T2 125 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 NUDT10Q8NFP7 164 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 C11orf52Q96A22 123 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 NUDT11Q96G61 164 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 TOMM7Q9P0U1 55 aa5.21□□□□□ -1.58
KARS-209ENST00000568378 TRBV20OR9-2A0A075B6H5 130 aa5.2□□□□□ -1.58
KARS-209ENST00000568378 RPL39P62891 51 aaKnown RBP5.2□□□□□ -1.58
KARS-209ENST00000568378 CCL20P78556 96 aa5.2□□□□□ -1.58
KARS-209ENST00000568378 C6orf226Q5I0X4 101 aa5.2□□□□□ -1.58
KARS-209ENST00000568378 CBLN2Q8IUK8 224 aa5.2□□□□□ -1.58
KARS-209ENST00000568378 FAM213BQ8TBF2 198 aa5.2□□□□□ -1.58
KARS-209ENST00000568378 SLC25A20O43772 301 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 SUMO2P61956 95 aaKnown RBP5.19□□□□□ -1.58
KARS-209ENST00000568378 Q8N377 158 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 MBD3L1Q8WWY6 194 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 BORCS7Q96B45 105 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 GNB1LQ9BYB4 327 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 SPANXA1Q9NS26 97 aa5.19□□□□□ -1.58
KARS-209ENST00000568378 SMKR1H3BMG3 65 aa5.18□□□□□ -1.58
KARS-209ENST00000568378 MRPS36P82909 103 aaKnown RBP5.18□□□□□ -1.58
KARS-209ENST00000568378 FAM104AQ969W3 186 aa5.18□□□□□ -1.58
KARS-209ENST00000568378 HIGD2AQ9BW72 106 aa5.18□□□□□ -1.58
KARS-209ENST00000568378 FXYD6-FXYD2A0A087WZ82 144 aa5.17□□□□□ -1.58
KARS-209ENST00000568378 PPP1R17O96001 155 aa5.17□□□□□ -1.58
KARS-209ENST00000568378 RAB4AP20338 218 aa5.17□□□□□ -1.58
KARS-209ENST00000568378 SPRR4Q96PI1 79 aa5.17□□□□□ -1.58
KARS-209ENST00000568378 MANBALQ9NQG1 85 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms