RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 ADIRFQ15847 76 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 NMSQ5H8A3 153 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 CFAP126Q5VTH2 177 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 LINC01600Q96MT4 127 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 DLG5Q8TDM6 1919 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 ABCC2Q92887 1545 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 DNMBPQ6XZF7 1577 aa1.04□□□□□ -2.24
TCF4-239ENST00000568186 MAP2P11137 1827 aaKnown RBP1.03□□□□□ -2.24
TCF4-239ENST00000568186 DOCK11Q5JSL3 2073 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 A0A1B0GWA3 101 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 MGPP08493 103 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 SMIM11AP58511 58 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 KRTAP10-4P60372 401 aaPredicted RBP1.03□□□□□ -2.24
TCF4-239ENST00000568186 SNRPFP62306 86 aaKnown RBP1.03□□□□□ -2.24
TCF4-239ENST00000568186 COX17Q14061 63 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 WFDC2Q14508 124 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 SMIM4Q8WVI0 70 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 PRR15LQ9BU68 103 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 TENM1Q9UKZ4 2725 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 CCDC88BA6NC98 1476 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 LRRIQ1Q96JM4 1722 aa1.03□□□□□ -2.24
TCF4-239ENST00000568186 GVQW2A0A096LPI5 108 aaPredicted RBP1.02□□□□□ -2.25
TCF4-239ENST00000568186 C7orf77A4D0Y5 90 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 HMGN2P05204 90 aaKnown RBP1.02□□□□□ -2.25
TCF4-239ENST00000568186 SPINT3P49223 89 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 FXYD6P3P58550 94 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 NEXMIFQ5QGS0 1516 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 SUPT6HQ7KZ85 1726 aaKnown RBP1.02□□□□□ -2.25
TCF4-239ENST00000568186 ASCC3Q8N3C0 2202 aaKnown RBP1.02□□□□□ -2.25
TCF4-239ENST00000568186 SMIM11BQ8TCY0 68 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.02□□□□□ -2.25
TCF4-239ENST00000568186 SPRR4Q96PI1 79 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 LINC00472Q9H8W2 130 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 PSENENQ9NZ42 101 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 ZNF236Q9UL36 1845 aa1.02□□□□□ -2.25
TCF4-239ENST00000568186 TECTAO75443 2155 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 SSC5DA1L4H1 1573 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 CFAP74Q9C0B2 1584 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 ERICH3Q5RHP9 1530 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 A0A087WVE0 104 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 KANTRA0A1W2PQU2 76 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 ARMS2P0C7Q2 107 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 BVES-AS1Q5T3Y7 98 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 LINC00643Q86TS7 51 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 FDCSPQ8NFU4 85 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 MED13LQ71F56 2210 aa1.01□□□□□ -2.25
TCF4-239ENST00000568186 RAPGEF6Q8TEU7 1601 aa1□□□□□ -2.25
TCF4-239ENST00000568186 KCPQ6ZWJ8 1503 aa1□□□□□ -2.25
TCF4-239ENST00000568186 G3V318 75 aa1□□□□□ -2.25
TCF4-239ENST00000568186 ACYP1P07311 99 aa1□□□□□ -2.25
TCF4-239ENST00000568186 IGLC2P0DOY2 106 aa1□□□□□ -2.25
TCF4-239ENST00000568186 IGLC3P0DOY3 106 aa1□□□□□ -2.25
TCF4-239ENST00000568186 HMGN3Q15651 99 aa1□□□□□ -2.25
TCF4-239ENST00000568186 Q6ZRX8 168 aa1□□□□□ -2.25
TCF4-239ENST00000568186 BTAF1O14981 1849 aa1□□□□□ -2.25
TCF4-239ENST00000568186 NUP188Q5SRE5 1749 aa1□□□□□ -2.25
TCF4-239ENST00000568186 ABCA1O95477 2261 aa1□□□□□ -2.25
TCF4-239ENST00000568186 TMEM131LA2VDJ0 1609 aa1□□□□□ -2.25
TCF4-239ENST00000568186 NCOA6Q14686 2063 aaPredicted RBP1□□□□□ -2.25
TCF4-239ENST00000568186 CCDC141Q6ZP82 1450 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 FLG2Q5D862 2391 aaPredicted RBP0.99□□□□□ -2.25
TCF4-239ENST00000568186 PDCD11Q14690 1871 aaKnown RBP0.99□□□□□ -2.25
TCF4-239ENST00000568186 IQCF6A8MYZ5 107 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 H3BUT2 72 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 GCHFRP30047 84 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 LINC00846Q9NV44 126 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 ABCA8O94911 1581 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 CUX1P39880 1505 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 NCOA2Q15596 1464 aa0.99□□□□□ -2.25
TCF4-239ENST00000568186 ANKARQ7Z5J8 1434 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 LTN1O94822 1766 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 LRRC37A2A6NM11 1700 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 MYMXA0A1B0GTQ4 84 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 LEPROTL1O95214 131 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 SPINK9Q5DT21 86 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 ABCC1P33527 1531 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 LRRC9Q6ZRR7 1453 aa0.98□□□□□ -2.25
TCF4-239ENST00000568186 ZC3H13Q5T200 1668 aaKnown RBP0.97□□□□□ -2.25
TCF4-239ENST00000568186 F5P12259 2224 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 PTPN23Q9H3S7 1636 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 CCDC180Q9P1Z9 1646 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 MYO7BQ6PIF6 2116 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 D6R8Y8 96 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 MUSTN1Q8IVN3 82 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 TMEM263Q8WUH6 116 aaKnown RBP0.97□□□□□ -2.25
TCF4-239ENST00000568186 SMCO4Q9NRQ5 59 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 PLAC8Q9NZF1 115 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 SCN11AQ9UI33 1791 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 KNDC1Q76NI1 1749 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 C1orf167Q5SNV9 1468 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 CLIP1P30622 1438 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 CNTRLQ7Z7A1 2325 aa0.97□□□□□ -2.25
TCF4-239ENST00000568186 ADAMTS12P58397 1594 aa0.96□□□□□ -2.26
TCF4-239ENST00000568186 CFDP00746 253 aaPredicted RBP0.96□□□□□ -2.26
TCF4-239ENST00000568186 PLGLAQ15195 96 aa0.96□□□□□ -2.26
TCF4-239ENST00000568186 C10orf113Q5VZT2 155 aa0.96□□□□□ -2.26
TCF4-239ENST00000568186 Q6JHZ5 121 aa0.96□□□□□ -2.26
TCF4-239ENST00000568186 DEFB107AQ8IZN7 70 aa0.96□□□□□ -2.26
TCF4-239ENST00000568186 UBE2D4Q9Y2X8 147 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms