RNA–Protein interactions for RNA: ENST00000567205.1

FANCA-222, Transcript of FA complementation group A, human

TSL 1 (best)

Gene FANCA, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-222	ENST00000567205	RAB5B	P61020	215 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	ERAS	Q7Z444	233 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	SLC7A5P1	Q8MH63	180 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	OR10D4P	Q8NGN7	298 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	FAM104A	Q969W3	186 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	OPRPN	Q99935	248 aa	Predicted RBP	10.58	□□□□□ -0.72
FANCA-222	ENST00000567205	CHAC1	Q9BUX1	264 aa		10.58	□□□□□ -0.72
FANCA-222	ENST00000567205		F8WDY8	70 aa		10.57	□□□□□ -0.72
FANCA-222	ENST00000567205	AMELX	Q99217	191 aa		10.57	□□□□□ -0.72
FANCA-222	ENST00000567205	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	INAFM2	P0DMQ5	153 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205		Q5VSD8	79 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	C18orf32	Q8TCD1	76 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	CARD19	Q96LW7	228 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	YPEL4	Q96NS1	127 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	SCGB3A1	Q96QR1	104 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	FAM30A	Q9NZY2	134 aa		10.56	□□□□□ -0.72
FANCA-222	ENST00000567205	FAM229A	H3BQW9	127 aa		10.55	□□□□□ -0.72
FANCA-222	ENST00000567205	C5orf38	Q86SI9	138 aa		10.55	□□□□□ -0.72
FANCA-222	ENST00000567205	CBLN2	Q8IUK8	224 aa		10.55	□□□□□ -0.72
FANCA-222	ENST00000567205	C2orf48	Q96LS8	159 aa		10.55	□□□□□ -0.72
FANCA-222	ENST00000567205	UBE2D1	P51668	147 aa		10.54	□□□□□ -0.72
FANCA-222	ENST00000567205	SYCN	Q0VAF6	134 aa		10.54	□□□□□ -0.72
FANCA-222	ENST00000567205	SDIM1	Q6ZPB5	146 aa		10.54	□□□□□ -0.72
FANCA-222	ENST00000567205	SCX	Q7RTU7	201 aa		10.54	□□□□□ -0.72
FANCA-222	ENST00000567205	LINC01561	Q8N1V8	128 aa		10.54	□□□□□ -0.72
FANCA-222	ENST00000567205		A0A087WZ39	114 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	SLPI	P03973	132 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	LINC00614	P0C842	121 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	HERVK_113	P63121	156 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	SPAG11B	Q08648	103 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	LINC00242	Q5T6M2	205 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	LINC00173	Q6ZV60	143 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	FAM19A3	Q7Z5A8	133 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	ORAOV1	Q8WV07	137 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	LINC00474	Q9P2X8	69 aa		10.53	□□□□□ -0.72
FANCA-222	ENST00000567205	IGLV4-69	A0A075B6H9	119 aa		10.52	□□□□□ -0.73
FANCA-222	ENST00000567205	CAMK2N2	Q96S95	79 aa		10.52	□□□□□ -0.73
FANCA-222	ENST00000567205	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.51	□□□□□ -0.73
FANCA-222	ENST00000567205	HBD	P02042	147 aa		10.51	□□□□□ -0.73
FANCA-222	ENST00000567205	CIRBP	Q14011	172 aa	Known RBP	10.51	□□□□□ -0.73
FANCA-222	ENST00000567205	GEMIN7	Q9H840	131 aa	Known RBP	10.51	□□□□□ -0.73
FANCA-222	ENST00000567205	PLA2G1B	P04054	148 aa	Known RBP	10.5	□□□□□ -0.73
FANCA-222	ENST00000567205	HAMP	P81172	84 aa		10.5	□□□□□ -0.73
FANCA-222	ENST00000567205	CIRBP-AS1	Q8TBR5	109 aa		10.5	□□□□□ -0.73
FANCA-222	ENST00000567205	NDUFA1	O15239	70 aa		10.49	□□□□□ -0.73
FANCA-222	ENST00000567205	CHCHD1	Q96BP2	118 aa	Known RBP	10.49	□□□□□ -0.73
FANCA-222	ENST00000567205	LOC107984640	A0A0U1RRK4	108 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	ATP5L	O75964	103 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	SMR3B	P02814	79 aa	Predicted RBP	10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	COX6A2	Q02221	97 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	PMVK	Q15126	192 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	RNF151	Q2KHN1	245 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	LINC00528	Q8N1L1	170 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	SPACA4	Q8TDM5	124 aa		10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	PACRG	Q96M98	296 aa	Predicted RBP	10.48	□□□□□ -0.73
FANCA-222	ENST00000567205	LINC00526	Q96FQ7	95 aa		10.47	□□□□□ -0.73
FANCA-222	ENST00000567205	DPH3	Q96FX2	82 aa		10.47	□□□□□ -0.73
FANCA-222	ENST00000567205	MRPL35	Q9NZE8	188 aa	Known RBP	10.47	□□□□□ -0.73
FANCA-222	ENST00000567205	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.47	□□□□□ -0.73
FANCA-222	ENST00000567205	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.46	□□□□□ -0.73
FANCA-222	ENST00000567205	PRSS2	P07478	247 aa		10.46	□□□□□ -0.73
FANCA-222	ENST00000567205		Q6ZRU5	148 aa		10.46	□□□□□ -0.73
FANCA-222	ENST00000567205	FAT1	Q14517	4588 aa		10.45	□□□□□ -0.74
FANCA-222	ENST00000567205	VPS13B	Q7Z7G8	4022 aa		10.45	□□□□□ -0.74
FANCA-222	ENST00000567205	TINCR	A0A1B0GVN0	87 aa		10.45	□□□□□ -0.74
FANCA-222	ENST00000567205	ZC2HC1B	Q5TFG8	222 aa		10.45	□□□□□ -0.74
FANCA-222	ENST00000567205	IGKV2-24	A0A0C4DH68	120 aa		10.44	□□□□□ -0.74
FANCA-222	ENST00000567205	BAGE3	Q86Y29	109 aa		10.44	□□□□□ -0.74
FANCA-222	ENST00000567205	LINC00469	Q8N7U9	141 aa		10.44	□□□□□ -0.74
FANCA-222	ENST00000567205	URB1-AS1	Q96HZ7	61 aa		10.44	□□□□□ -0.74
FANCA-222	ENST00000567205	CST9L	Q9H4G1	147 aa		10.44	□□□□□ -0.74
FANCA-222	ENST00000567205		A0A096LNJ9	63 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205		A0A0J9YXV3	536 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	TRBV30	A0A0K0K1B3	111 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	TRGC2	P03986	189 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	CXCL5	P42830	114 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	MAJIN	Q3KP22	176 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205		Q8IZM0	81 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	PLAC8	Q9NZF1	115 aa		10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	SRRM2	Q9UQ35	2752 aa	Known RBP	10.43	□□□□□ -0.74
FANCA-222	ENST00000567205	IGLV5-45	A0A087WSX0	123 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205		A0A087WYN8	130 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205		A0A096LNI7	61 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205		H3BRM9	83 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205	HSBP1	O75506	76 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205	CHTF8	P0CG12	524 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205	PDZD11	Q5EBL8	140 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205	CDKN2A-AS1	Q9UH64	79 aa		10.42	□□□□□ -0.74
FANCA-222	ENST00000567205	DNAH8	Q96JB1	4490 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	PTTG1IP	P53801	180 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	NDUFA6	P56556	154 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	CKS1B	P61024	79 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	PMCHL1	Q16048	86 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	HERC1	Q15751	4861 aa		10.41	□□□□□ -0.74
FANCA-222	ENST00000567205	COLCA2	A8K830	154 aa		10.4	□□□□□ -0.74
FANCA-222	ENST00000567205	PANO1	I0J062	215 aa		10.4	□□□□□ -0.74
FANCA-222	ENST00000567205	RPL18A	Q02543	176 aa	Known RBP	10.4	□□□□□ -0.74
FANCA-222	ENST00000567205	KIAA0087	Q14695	138 aa		10.4	□□□□□ -0.74
FANCA-222	ENST00000567205	C7orf33	Q8WU49	177 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms