RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 C9orf163Q8N9P6 203 aa16.96■□□□□ 0.31
NME3-209ENST00000566600 CHCHD1Q96BP2 118 aaKnown RBP16.96■□□□□ 0.31
NME3-209ENST00000566600 SCO1O75880 301 aa16.95■□□□□ 0.3
NME3-209ENST00000566600 HBDP02042 147 aa16.95■□□□□ 0.3
NME3-209ENST00000566600 LINC01620Q4KN68 170 aa16.95■□□□□ 0.3
NME3-209ENST00000566600 ZNF561-AS1K7EIQ3 104 aa16.94■□□□□ 0.3
NME3-209ENST00000566600 ZC2HC1BQ5TFG8 222 aa16.94■□□□□ 0.3
NME3-209ENST00000566600 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.93■□□□□ 0.3
NME3-209ENST00000566600 SEC11AP67812 179 aa16.93■□□□□ 0.3
NME3-209ENST00000566600 FAM19A3Q7Z5A8 133 aa16.93■□□□□ 0.3
NME3-209ENST00000566600 A0A096LNJ9 63 aa16.92■□□□□ 0.3
NME3-209ENST00000566600 SLPIP03973 132 aa16.92■□□□□ 0.3
NME3-209ENST00000566600 BAGE3Q86Y29 109 aa16.92■□□□□ 0.3
NME3-209ENST00000566600 S100A1P23297 94 aa16.9■□□□□ 0.3
NME3-209ENST00000566600 OR10D4PQ8NGN7 298 aa16.9■□□□□ 0.3
NME3-209ENST00000566600 IGHV3-64A0A075B6Q5 118 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 A0A087WZ39 114 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 HERVK_113P63121 156 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 COX6A2Q02221 97 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 PMVKQ15126 192 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 PMCHL1Q16048 86 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 Q6ZSA8 131 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 KIAA1109Q2LD37 5005 aa16.89■□□□□ 0.29
NME3-209ENST00000566600 ATP5LO75964 103 aa16.88■□□□□ 0.29
NME3-209ENST00000566600 PDZD11Q5EBL8 140 aa16.88■□□□□ 0.29
NME3-209ENST00000566600 CST9LQ9H4G1 147 aa16.88■□□□□ 0.29
NME3-209ENST00000566600 XGP55808 180 aa16.87■□□□□ 0.29
NME3-209ENST00000566600 LINC01561Q8N1V8 128 aa16.87■□□□□ 0.29
NME3-209ENST00000566600 GEMIN7Q9H840 131 aaKnown RBP16.87■□□□□ 0.29
NME3-209ENST00000566600 FAM30AQ9NZY2 134 aa16.87■□□□□ 0.29
NME3-209ENST00000566600 HSBP1O75506 76 aa16.86■□□□□ 0.29
NME3-209ENST00000566600 ORAOV1Q8WV07 137 aa16.86■□□□□ 0.29
NME3-209ENST00000566600 IGLV4-69A0A075B6H9 119 aa16.85■□□□□ 0.29
NME3-209ENST00000566600 SPAG11BQ08648 103 aa16.85■□□□□ 0.29
NME3-209ENST00000566600 SDIM1Q6ZPB5 146 aa16.85■□□□□ 0.29
NME3-209ENST00000566600 LINC00526Q96FQ7 95 aa16.85■□□□□ 0.29
NME3-209ENST00000566600 C2orf48Q96LS8 159 aa16.85■□□□□ 0.29
NME3-209ENST00000566600 SYCNQ0VAF6 134 aa16.84■□□□□ 0.29
NME3-209ENST00000566600 CARD19Q96LW7 228 aa16.84■□□□□ 0.29
NME3-209ENST00000566600 PKIGQ9Y2B9 76 aa16.84■□□□□ 0.29
NME3-209ENST00000566600 A0A0J9YXV3 536 aa16.83■□□□□ 0.28
NME3-209ENST00000566600 F8WDY8 70 aa16.83■□□□□ 0.28
NME3-209ENST00000566600 TINCRA0A1B0GVN0 87 aa16.82■□□□□ 0.28
NME3-209ENST00000566600 CAMK2N2Q96S95 79 aa16.82■□□□□ 0.28
NME3-209ENST00000566600 APOBP04114 4563 aaKnown RBP16.81■□□□□ 0.28
NME3-209ENST00000566600 ATP6V1G1O75348 118 aa16.81■□□□□ 0.28
NME3-209ENST00000566600 NDUFA6P56556 154 aa16.81■□□□□ 0.28
NME3-209ENST00000566600 RYR1P21817 5038 aa16.79■□□□□ 0.28
NME3-209ENST00000566600 SERF1AO75920 110 aa16.79■□□□□ 0.28
NME3-209ENST00000566600 CHAC1Q9BUX1 264 aa16.79■□□□□ 0.28
NME3-209ENST00000566600 CDKN2A-AS1Q9UH64 79 aa16.79■□□□□ 0.28
NME3-209ENST00000566600 LINC00469Q8N7U9 141 aa16.78■□□□□ 0.28
NME3-209ENST00000566600 PACRGQ96M98 296 aaPredicted RBP16.78■□□□□ 0.28
NME3-209ENST00000566600 HERC2O95714 4834 aa16.77■□□□□ 0.28
NME3-209ENST00000566600 IGLV5-45A0A087WSX0 123 aa16.76■□□□□ 0.27
NME3-209ENST00000566600 Q6ZRU5 148 aa16.76■□□□□ 0.27
NME3-209ENST00000566600 FAM19A2Q8N3H0 131 aa16.76■□□□□ 0.27
NME3-209ENST00000566600 NDUFA1O15239 70 aa16.75■□□□□ 0.27
NME3-209ENST00000566600 HAMPP81172 84 aa16.75■□□□□ 0.27
NME3-209ENST00000566600 SCXQ7RTU7 201 aa16.75■□□□□ 0.27
NME3-209ENST00000566600 Q8N1X5 172 aa16.75■□□□□ 0.27
NME3-209ENST00000566600 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
NME3-209ENST00000566600 PRSS2P07478 247 aa16.74■□□□□ 0.27
NME3-209ENST00000566600 IGLC3P0DOY3 106 aa16.74■□□□□ 0.27
NME3-209ENST00000566600 LINC00310P59036 64 aa16.74■□□□□ 0.27
NME3-209ENST00000566600 RNF151Q2KHN1 245 aa16.74■□□□□ 0.27
NME3-209ENST00000566600 HSPG2P98160 4391 aa16.74■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BKO60814 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BJP06899 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BOP23527 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BBP33778 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BDP58876 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BCP62807 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 KIAA0087Q14695 138 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST2H2BEQ16778 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BHQ93079 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BNQ99877 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 HIST1H2BMQ99879 126 aa16.73■□□□□ 0.27
NME3-209ENST00000566600 MRPL35Q9NZE8 188 aaKnown RBP16.73■□□□□ 0.27
NME3-209ENST00000566600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.73■□□□□ 0.27
NME3-209ENST00000566600 DNAH8Q96JB1 4490 aa16.72■□□□□ 0.27
NME3-209ENST00000566600 H3BRM9 83 aa16.72■□□□□ 0.27
NME3-209ENST00000566600 CIRBPQ14011 172 aaKnown RBP16.72■□□□□ 0.27
NME3-209ENST00000566600 CIRBP-AS1Q8TBR5 109 aa16.72■□□□□ 0.27
NME3-209ENST00000566600 Q8IZM0 81 aa16.71■□□□□ 0.27
NME3-209ENST00000566600 TRAV12-1A0A0B4J245 112 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 LOC107984640A0A0U1RRK4 108 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 LEPROTL1O95214 131 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 C6orf226Q5I0X4 101 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 DPH3Q96FX2 82 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 TOMM7Q9P0U1 55 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 LINC00474Q9P2X8 69 aa16.7■□□□□ 0.26
NME3-209ENST00000566600 CHTOPQ9Y3Y2 248 aaKnown RBP16.69■□□□□ 0.26
NME3-209ENST00000566600 SMIM1B2RUZ4 78 aa16.68■□□□□ 0.26
NME3-209ENST00000566600 NUPR1O60356 82 aa16.68■□□□□ 0.26
NME3-209ENST00000566600 SMR3BP02814 79 aaPredicted RBP16.68■□□□□ 0.26
NME3-209ENST00000566600 SPACA4Q8TDM5 124 aa16.68■□□□□ 0.26
NME3-209ENST00000566600 HSPB8Q9UJY1 196 aa16.68■□□□□ 0.26
NME3-209ENST00000566600 PANO1I0J062 215 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms