RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 COX11Q9Y6N1 276 aa9.91□□□□□ -0.82
SPG7-213ENST00000566221 IGKV2D-24A0A075B6R9 120 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 DPM2O94777 84 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 SEC11AP67812 179 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 S100A12P80511 92 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 LINC00518Q8N0U6 118 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
SPG7-213ENST00000566221 IGLV10-54A0A075B6I4 117 aa9.89□□□□□ -0.83
SPG7-213ENST00000566221 IGKCP01834 107 aa9.89□□□□□ -0.83
SPG7-213ENST00000566221 MRPL35Q9NZE8 188 aaKnown RBP9.89□□□□□ -0.83
SPG7-213ENST00000566221 UBE2D1P51668 147 aa9.88□□□□□ -0.83
SPG7-213ENST00000566221 ZC2HC1BQ5TFG8 222 aa9.88□□□□□ -0.83
SPG7-213ENST00000566221 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
SPG7-213ENST00000566221 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
SPG7-213ENST00000566221 C12orf57Q99622 126 aa9.88□□□□□ -0.83
SPG7-213ENST00000566221 HSBP1L1C9JCN9 74 aa9.87□□□□□ -0.83
SPG7-213ENST00000566221 PSCAO43653 123 aa9.87□□□□□ -0.83
SPG7-213ENST00000566221 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
SPG7-213ENST00000566221 Q6ZRN7 208 aaPredicted RBP9.87□□□□□ -0.83
SPG7-213ENST00000566221 PCLOQ9Y6V0 5065 aa9.86□□□□□ -0.83
SPG7-213ENST00000566221 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
SPG7-213ENST00000566221 XCL1P47992 114 aa9.86□□□□□ -0.83
SPG7-213ENST00000566221 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
SPG7-213ENST00000566221 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
SPG7-213ENST00000566221 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SPG7-213ENST00000566221 CD164L2Q6UWJ8 174 aa9.85□□□□□ -0.83
SPG7-213ENST00000566221 VAMP8Q9BV40 100 aa9.85□□□□□ -0.83
SPG7-213ENST00000566221 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.83
SPG7-213ENST00000566221 HERVK_113P63121 156 aa9.84□□□□□ -0.83
SPG7-213ENST00000566221 PMCHL2Q9BQD1 86 aa9.84□□□□□ -0.83
SPG7-213ENST00000566221 FOXI1Q12951 378 aa9.83□□□□□ -0.84
SPG7-213ENST00000566221 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
SPG7-213ENST00000566221 HERC2O95714 4834 aa9.83□□□□□ -0.84
SPG7-213ENST00000566221 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
SPG7-213ENST00000566221 C11orf86A6NJI1 115 aa9.82□□□□□ -0.84
SPG7-213ENST00000566221 RTL8CO15255 209 aa9.82□□□□□ -0.84
SPG7-213ENST00000566221 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
SPG7-213ENST00000566221 FRAS1Q86XX4 4008 aa9.82□□□□□ -0.84
SPG7-213ENST00000566221 IGLV5-45A0A087WSX0 123 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 IGHV3OR16-9A0A0B4J2B5 98 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 H3BRM9 83 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 COX7A2LO14548 114 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 HERVK_113P61574 105 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
SPG7-213ENST00000566221 COX6A2Q02221 97 aa9.8□□□□□ -0.84
SPG7-213ENST00000566221 MAPKAPK5-AS1Q8N8E1 139 aa9.8□□□□□ -0.84
SPG7-213ENST00000566221 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
SPG7-213ENST00000566221 DNAH10Q8IVF4 4471 aa9.8□□□□□ -0.84
SPG7-213ENST00000566221 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
SPG7-213ENST00000566221 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
SPG7-213ENST00000566221 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
SPG7-213ENST00000566221 LINC00469Q8N7U9 141 aa9.79□□□□□ -0.84
SPG7-213ENST00000566221 A0A087WZ39 114 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 ZNF22P17026 224 aaPredicted RBP9.78□□□□□ -0.84
SPG7-213ENST00000566221 MALP21145 153 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 SPATA45Q537H7 98 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 C5orf38Q86SI9 138 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 LINC01561Q8N1V8 128 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 STPG4Q8N801 248 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 PAM16Q9Y3D7 125 aa9.78□□□□□ -0.84
SPG7-213ENST00000566221 hDV102S1A0JD36 115 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 USP17L23D6RBM5 183 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 E9PLD3 99 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 APOMO95445 188 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 CFAP161Q6P656 301 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 RYR1P21817 5038 aa9.77□□□□□ -0.85
SPG7-213ENST00000566221 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 LECT2O14960 151 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 TNP2Q05952 138 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 C15orf56Q8N910 161 aa9.76□□□□□ -0.85
SPG7-213ENST00000566221 A0A087WTM6 91 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 TSTD3H0UI37 97 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 EREGO14944 169 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 WFDC2Q14508 124 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 PLEKHB2Q96CS7 222 aa9.75□□□□□ -0.85
SPG7-213ENST00000566221 ANKRD39Q53RE8 183 aa9.74□□□□□ -0.85
SPG7-213ENST00000566221 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
SPG7-213ENST00000566221 IGHV3-64A0A075B6Q5 118 aa9.73□□□□□ -0.85
SPG7-213ENST00000566221 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
SPG7-213ENST00000566221 SMIM1B2RUZ4 78 aa9.73□□□□□ -0.85
SPG7-213ENST00000566221 LEPROTO15243 131 aa9.73□□□□□ -0.85
SPG7-213ENST00000566221 DLEU1O43261 78 aa9.73□□□□□ -0.85
SPG7-213ENST00000566221 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
SPG7-213ENST00000566221 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
SPG7-213ENST00000566221 COX8AP10176 69 aa9.72□□□□□ -0.85
SPG7-213ENST00000566221 Q8N814 137 aa9.72□□□□□ -0.85
SPG7-213ENST00000566221 UQCR10Q9UDW1 63 aa9.72□□□□□ -0.85
SPG7-213ENST00000566221 IGLV5-39A0A0G2JS06 123 aa9.71□□□□□ -0.86
SPG7-213ENST00000566221 SPAG11BQ08648 103 aa9.71□□□□□ -0.86
SPG7-213ENST00000566221 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.86
SPG7-213ENST00000566221 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
SPG7-213ENST00000566221 NMUP48645 174 aa9.7□□□□□ -0.86
SPG7-213ENST00000566221 SLC25A34Q6PIV7 304 aa9.7□□□□□ -0.86
SPG7-213ENST00000566221 MIEN1Q9BRT3 115 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms