RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 LOC107984640A0A0U1RRK4 108 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 F2Z2F3 143 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 TRGC1P0CF51 173 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 ZNF25P17030 456 aaPredicted RBP5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 CAMPP49913 170 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 RPS20P60866 119 aaKnown RBP5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 CD164L2Q6UWJ8 174 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 DAND5Q8N907 189 aa5.72□□□□□ -1.49
HDGFL3-204ENST00000563790 RAB19A4D1S5 217 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 SDHAF1A6NFY7 115 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 MRPL52Q86TS9 123 aaKnown RBP5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 KCNRGQ8N5I3 272 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 FAM213BQ8TBF2 198 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 CDC42SE2Q9NRR3 84 aa5.71□□□□□ -1.5
HDGFL3-204ENST00000563790 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
HDGFL3-204ENST00000563790 ARPC5O15511 151 aa5.7□□□□□ -1.5
HDGFL3-204ENST00000563790 PFDN1O60925 122 aa5.7□□□□□ -1.5
HDGFL3-204ENST00000563790 APOMO95445 188 aa5.7□□□□□ -1.5
HDGFL3-204ENST00000563790 SMIM12Q96EX1 92 aa5.7□□□□□ -1.5
HDGFL3-204ENST00000563790 PRSS47A8MTI9 375 aa5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 UMAD1C9J7I0 102 aa5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 APCSP02743 223 aa5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 LGALS3P17931 250 aaKnown RBP5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 LINC00242Q5T6M2 205 aa5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 RNASE7Q9H1E1 156 aaKnown RBP5.69□□□□□ -1.5
HDGFL3-204ENST00000563790 FAM168BA1KXE4 195 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 C9orf118A6NHY6 69 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 IFNA1P01562 189 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 FAM104AQ969W3 186 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
HDGFL3-204ENST00000563790 SMLR1H3BR10 107 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 K7EN84 100 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 BCL2L11O43521 198 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 ZNF345Q14585 488 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 TWIST1Q15672 202 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 C2orf48Q96LS8 159 aa5.67□□□□□ -1.5
HDGFL3-204ENST00000563790 XKRY2A2RUG3 117 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 I3L3M4 83 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 GNG4P50150 75 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 RNF151Q2KHN1 245 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 MANBALQ9NQG1 85 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 TMEM242Q9NWH2 141 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 GNG13Q9P2W3 67 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 UBE2D4Q9Y2X8 147 aa5.66□□□□□ -1.5
HDGFL3-204ENST00000563790 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.5
HDGFL3-204ENST00000563790 FAM229BQ4G0N7 80 aa5.65□□□□□ -1.5
HDGFL3-204ENST00000563790 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
HDGFL3-204ENST00000563790 ISOC2Q96AB3 205 aa5.65□□□□□ -1.5
HDGFL3-204ENST00000563790 CAMK2N2Q96S95 79 aa5.65□□□□□ -1.5
HDGFL3-204ENST00000563790 C1orf196B1AJZ1 125 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 COX7A2LO14548 114 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 CT83Q5H943 113 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 TEX261Q6UWH6 196 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 MRAP2Q96G30 205 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 BTF3L4Q96K17 158 aa5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 CSDC2Q9Y534 153 aaKnown RBP5.64□□□□□ -1.51
HDGFL3-204ENST00000563790 PMCHP20382 165 aa5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 RNASE13Q5GAN3 156 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 SPAG11AQ6PDA7 123 aa5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 C5orf38Q86SI9 138 aa5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 FAM210AQ96ND0 272 aa5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 MRPL35Q9NZE8 188 aaKnown RBP5.63□□□□□ -1.51
HDGFL3-204ENST00000563790 C7orf77A4D0Y5 90 aa5.62□□□□□ -1.51
HDGFL3-204ENST00000563790 SPAG11BQ08648 103 aa5.62□□□□□ -1.51
HDGFL3-204ENST00000563790 Q6ZUT4 128 aa5.62□□□□□ -1.51
HDGFL3-204ENST00000563790 OCC1Q8TAD7 63 aa5.62□□□□□ -1.51
HDGFL3-204ENST00000563790 C6orf48Q9UBA6 75 aa5.62□□□□□ -1.51
HDGFL3-204ENST00000563790 IGHV3OR16-9A0A0B4J2B5 98 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 HMSDA8MTL9 139 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 PDE6DO43924 150 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 MALP21145 153 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 OR10D4PQ8NGN7 298 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 SMDT1Q9H4I9 107 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
HDGFL3-204ENST00000563790 IGKV2D-26A0A0A0MRZ7 120 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 TRAV13-1A0A0B4J241 112 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 RAB4AP20338 218 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 SPRR2EP22531 72 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 SPRR2BP35325 72 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 SPRR2AP35326 72 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 KIAA0087Q14695 138 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 UNQ6190/PRO20217Q6UXQ8 127 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 FAM19A5Q7Z5A7 132 aaPredicted RBP5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 NRACQ8N912 160 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 BIN3Q9NQY0 253 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 MED9Q9NWA0 146 aa5.6□□□□□ -1.51
HDGFL3-204ENST00000563790 UBE2BP63146 152 aa5.59□□□□□ -1.51
HDGFL3-204ENST00000563790 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
HDGFL3-204ENST00000563790 TIMM21Q9BVV7 248 aa5.59□□□□□ -1.51
HDGFL3-204ENST00000563790 TMEM191AQ9H0A3 160 aa5.59□□□□□ -1.51
HDGFL3-204ENST00000563790 F8WDY8 70 aa5.58□□□□□ -1.52
HDGFL3-204ENST00000563790 M0QXV9 152 aa5.58□□□□□ -1.52
HDGFL3-204ENST00000563790 FAM231DQ6ZW35 169 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms