RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 FAM104AQ969W3 186 aa6.72□□□□□ -1.33
UBFD1-202ENST00000563366 TRAV8-6A0A0B4J262 113 aa6.71□□□□□ -1.34
UBFD1-202ENST00000563366 A0A0J9YXV3 536 aa6.71□□□□□ -1.34
UBFD1-202ENST00000563366 ZNF22P17026 224 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-202ENST00000563366 LBHQ53QV2 105 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-202ENST00000563366 IGLV5-45A0A087WSX0 123 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 TMEM262E9PQX1 116 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
UBFD1-202ENST00000563366 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
UBFD1-202ENST00000563366 LINC00469Q8N7U9 141 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 PLEKHB2Q96CS7 222 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 KRTAP9-2Q9BYQ4 174 aa6.7□□□□□ -1.34
UBFD1-202ENST00000563366 IGKV2D-26A0A0A0MRZ7 120 aa6.69□□□□□ -1.34
UBFD1-202ENST00000563366 M0R143 59 aa6.69□□□□□ -1.34
UBFD1-202ENST00000563366 LGALS3P17931 250 aaKnown RBP6.69□□□□□ -1.34
UBFD1-202ENST00000563366 RBX1P62877 108 aa6.69□□□□□ -1.34
UBFD1-202ENST00000563366 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
UBFD1-202ENST00000563366 TRAV13-1A0A0B4J241 112 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 J3QQQ9 107 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 LEPROTO15243 131 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 TCTAP57738 103 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 CTAG1AP78358 180 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 SS18Q15532 418 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 LINC00242Q5T6M2 205 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 LYPD5Q6UWN5 251 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
UBFD1-202ENST00000563366 IGLV4-60A0A075B6I1 120 aa6.67□□□□□ -1.34
UBFD1-202ENST00000563366 IGHV1-58A0A0C4DH39 117 aa6.67□□□□□ -1.34
UBFD1-202ENST00000563366 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
UBFD1-202ENST00000563366 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
UBFD1-202ENST00000563366 IGHV3-30-3P0DP02 117 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 HSD52Q0P140 79 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 SCGB1D4Q6XE38 83 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 C2orf91Q6ZV80 131 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 CDKN2A-AS1Q9UH64 79 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
UBFD1-202ENST00000563366 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
UBFD1-202ENST00000563366 TAL2Q16559 108 aa6.65□□□□□ -1.34
UBFD1-202ENST00000563366 SFTA2Q6UW10 78 aa6.65□□□□□ -1.34
UBFD1-202ENST00000563366 IGLV5-39A0A0G2JS06 123 aa6.64□□□□□ -1.35
UBFD1-202ENST00000563366 KRTAP9-6A0A140TA67 174 aa6.64□□□□□ -1.35
UBFD1-202ENST00000563366 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
UBFD1-202ENST00000563366 CRPP02741 224 aa6.64□□□□□ -1.35
UBFD1-202ENST00000563366 REG3AQ06141 175 aa6.64□□□□□ -1.35
UBFD1-202ENST00000563366 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
UBFD1-202ENST00000563366 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 IGKV3OR2-268A0A0C4DH90 116 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 SMIM1B2RUZ4 78 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 CCL18P55774 89 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 ZFAND6Q6FIF0 208 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 LINC00269Q8N2A0 174 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 SNHG12Q9BXW3 62 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 TTTY13Q9BZ97 58 aa6.63□□□□□ -1.35
UBFD1-202ENST00000563366 IGHV3-64A0A075B6Q5 118 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 A0A087WZ39 114 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 TRAV8-3A0A0A6YYJ7 113 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
UBFD1-202ENST00000563366 COX6A2Q02221 97 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 COL5A1-AS1Q5SY13 56 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 CD164L2Q6UWJ8 174 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 HIST1H4GQ99525 98 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
UBFD1-202ENST00000563366 PRR34Q9NV39 138 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 TP73-AS1Q9UF72 201 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 NDUFA12Q9UI09 145 aa6.62□□□□□ -1.35
UBFD1-202ENST00000563366 A6NDN8 102 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 IGLL5B9A064 214 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 TSPEAR-AS2P59090 65 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 HERV-K104P63124 156 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 BATFQ16520 125 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 MIAQ16674 131 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 ESRGQ1W209 222 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 BVES-AS1Q5T3Y7 98 aa6.61□□□□□ -1.35
UBFD1-202ENST00000563366 K7EP13 123 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 NDUFA1O15239 70 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 XCL1P47992 114 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 SRSF9Q13242 221 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBFD1-202ENST00000563366 CIRBPQ14011 172 aaKnown RBP6.6□□□□□ -1.35
UBFD1-202ENST00000563366 CLPSL2Q6UWE3 100 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 Q6ZVH6 145 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 WFDC10BQ8IUB3 73 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 ORAOV1Q8WV07 137 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
UBFD1-202ENST00000563366 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
UBFD1-202ENST00000563366 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
UBFD1-202ENST00000563366 COX7A2LO14548 114 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 TIMM17BO60830 172 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 APOMO95445 188 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
UBFD1-202ENST00000563366 CEND1Q8N111 149 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms