RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 PSORS1C2Q9UIG4 136 aa9.67□□□□□ -0.86
CLK3-211ENST00000563297 RPL18AQ02543 176 aaKnown RBP9.66□□□□□ -0.86
CLK3-211ENST00000563297 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CLK3-211ENST00000563297 PHF5AQ7RTV0 110 aaKnown RBP9.66□□□□□ -0.86
CLK3-211ENST00000563297 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.86
CLK3-211ENST00000563297 A0A1B0GW15 77 aa9.65□□□□□ -0.86
CLK3-211ENST00000563297 TCAPO15273 167 aa9.65□□□□□ -0.86
CLK3-211ENST00000563297 SRSF3P84103 164 aaKnown RBP9.65□□□□□ -0.86
CLK3-211ENST00000563297 COMMD7Q86VX2 200 aa9.65□□□□□ -0.86
CLK3-211ENST00000563297 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
CLK3-211ENST00000563297 MT-ND6P03923 174 aa9.64□□□□□ -0.87
CLK3-211ENST00000563297 SLC7A5P1Q8MH63 180 aa9.64□□□□□ -0.87
CLK3-211ENST00000563297 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
CLK3-211ENST00000563297 MRPL35Q9NZE8 188 aaKnown RBP9.64□□□□□ -0.87
CLK3-211ENST00000563297 D6R8Y8 96 aa9.63□□□□□ -0.87
CLK3-211ENST00000563297 F8WDY8 70 aa9.63□□□□□ -0.87
CLK3-211ENST00000563297 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
CLK3-211ENST00000563297 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
CLK3-211ENST00000563297 SPANXA1Q9NS26 97 aa9.63□□□□□ -0.87
CLK3-211ENST00000563297 NPYP01303 97 aa9.62□□□□□ -0.87
CLK3-211ENST00000563297 PEA15Q15121 130 aa9.62□□□□□ -0.87
CLK3-211ENST00000563297 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
CLK3-211ENST00000563297 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
CLK3-211ENST00000563297 MRPL54Q6P161 138 aaKnown RBP9.62□□□□□ -0.87
CLK3-211ENST00000563297 A0A1B0GXF2 115 aa9.61□□□□□ -0.87
CLK3-211ENST00000563297 F8W036 122 aa9.61□□□□□ -0.87
CLK3-211ENST00000563297 HBBP68871 147 aa9.61□□□□□ -0.87
CLK3-211ENST00000563297 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
CLK3-211ENST00000563297 IMMP2LQ96T52 175 aa9.61□□□□□ -0.87
CLK3-211ENST00000563297 NDUFA1O15239 70 aa9.6□□□□□ -0.87
CLK3-211ENST00000563297 S100A8P05109 93 aa9.6□□□□□ -0.87
CLK3-211ENST00000563297 TLX1NBP0CAT3 122 aa9.6□□□□□ -0.87
CLK3-211ENST00000563297 SMDT1Q9H4I9 107 aa9.6□□□□□ -0.87
CLK3-211ENST00000563297 FAM168BA1KXE4 195 aa9.59□□□□□ -0.87
CLK3-211ENST00000563297 IFITM10A6NMD0 228 aa9.59□□□□□ -0.87
CLK3-211ENST00000563297 PPBPP02775 128 aa9.59□□□□□ -0.87
CLK3-211ENST00000563297 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
CLK3-211ENST00000563297 C6orf48Q9UBA6 75 aa9.59□□□□□ -0.87
CLK3-211ENST00000563297 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
CLK3-211ENST00000563297 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
CLK3-211ENST00000563297 UQCC3Q6UW78 93 aa9.58□□□□□ -0.88
CLK3-211ENST00000563297 TMEM136Q6ZRR5 245 aa9.58□□□□□ -0.88
CLK3-211ENST00000563297 A0A087WZ39 114 aa9.57□□□□□ -0.88
CLK3-211ENST00000563297 PYGO1Q9Y3Y4 419 aa9.57□□□□□ -0.88
CLK3-211ENST00000563297 RAB5AP20339 215 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 IFI27P40305 119 aaPredicted RBP9.56□□□□□ -0.88
CLK3-211ENST00000563297 GAGE2EQ4V326 116 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 PRELID3AQ96N28 172 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 GAGE2DQ9UEU5 116 aa9.56□□□□□ -0.88
CLK3-211ENST00000563297 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
CLK3-211ENST00000563297 TGIF2-C20orf24A0A0A6YYL0 155 aa9.55□□□□□ -0.88
CLK3-211ENST00000563297 DIRC1Q969H9 104 aa9.55□□□□□ -0.88
CLK3-211ENST00000563297 PRSS47A8MTI9 375 aa9.54□□□□□ -0.88
CLK3-211ENST00000563297 ATP5L2Q7Z4Y8 100 aa9.54□□□□□ -0.88
CLK3-211ENST00000563297 FAM19A5Q7Z5A7 132 aaPredicted RBP9.54□□□□□ -0.88
CLK3-211ENST00000563297 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
CLK3-211ENST00000563297 H0Y9J4 135 aa9.53□□□□□ -0.88
CLK3-211ENST00000563297 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
CLK3-211ENST00000563297 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
CLK3-211ENST00000563297 ATP6V1G1O75348 118 aa9.52□□□□□ -0.89
CLK3-211ENST00000563297 S100A1P23297 94 aa9.52□□□□□ -0.89
CLK3-211ENST00000563297 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
CLK3-211ENST00000563297 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
CLK3-211ENST00000563297 TMEM218A2RU14 115 aa9.51□□□□□ -0.89
CLK3-211ENST00000563297 UBE2D1P51668 147 aa9.51□□□□□ -0.89
CLK3-211ENST00000563297 LPAP08519 4548 aa9.5□□□□□ -0.89
CLK3-211ENST00000563297 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
CLK3-211ENST00000563297 TEX43Q6ZNM6 134 aa9.5□□□□□ -0.89
CLK3-211ENST00000563297 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
CLK3-211ENST00000563297 LAMTOR2Q9Y2Q5 125 aa9.5□□□□□ -0.89
CLK3-211ENST00000563297 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
CLK3-211ENST00000563297 M0QXV9 152 aa9.49□□□□□ -0.89
CLK3-211ENST00000563297 KRTAP1-4P0C5Y4 121 aa9.49□□□□□ -0.89
CLK3-211ENST00000563297 C9orf129Q5T035 196 aaKnown RBP9.49□□□□□ -0.89
CLK3-211ENST00000563297 Q8N8P6 123 aa9.49□□□□□ -0.89
CLK3-211ENST00000563297 PACRGQ96M98 296 aaPredicted RBP9.49□□□□□ -0.89
CLK3-211ENST00000563297 MAP1LC3AQ9H492 121 aa9.49□□□□□ -0.89
CLK3-211ENST00000563297 UBE2BP63146 152 aa9.48□□□□□ -0.89
CLK3-211ENST00000563297 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
CLK3-211ENST00000563297 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
CLK3-211ENST00000563297 AMELXQ99217 191 aa9.48□□□□□ -0.89
CLK3-211ENST00000563297 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
CLK3-211ENST00000563297 C2orf88Q9BSF0 95 aa9.47□□□□□ -0.89
CLK3-211ENST00000563297 SEC11CQ9BY50 192 aa9.47□□□□□ -0.89
CLK3-211ENST00000563297 VCX2Q9H322 139 aa9.47□□□□□ -0.89
CLK3-211ENST00000563297 IGLV1-50A0A075B6I6 118 aa9.46□□□□□ -0.9
CLK3-211ENST00000563297 Q6ZN92 141 aa9.46□□□□□ -0.9
CLK3-211ENST00000563297 IGIPA6NJ69 53 aa9.45□□□□□ -0.9
CLK3-211ENST00000563297 APOC3P02656 99 aa9.45□□□□□ -0.9
CLK3-211ENST00000563297 FAM19A3Q7Z5A8 133 aa9.45□□□□□ -0.9
CLK3-211ENST00000563297 ANAPC16Q96DE5 110 aa9.45□□□□□ -0.9
CLK3-211ENST00000563297 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
CLK3-211ENST00000563297 PRSS2P07478 247 aa9.44□□□□□ -0.9
CLK3-211ENST00000563297 PNRC1Q12796 327 aaPredicted RBP9.44□□□□□ -0.9
CLK3-211ENST00000563297 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
CLK3-211ENST00000563297 C6orf226Q5I0X4 101 aa9.44□□□□□ -0.9
CLK3-211ENST00000563297 K7EMI3 77 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms