RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 NDUFV3P56181 108 aaKnown RBP3.6□□□□□ -1.83
TCF4-213ENST00000562543 UBE2L3P68036 154 aaKnown RBP3.6□□□□□ -1.83
TCF4-213ENST00000562543 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 TMEM78Q5T7P6 136 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 SPATA31B1PQ5VZV4 182 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 MIR17HGQ75NE6 70 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 PRR26Q8N8Z3 221 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 IFI27L1Q96BM0 104 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 TPPP3Q9BW30 176 aa3.6□□□□□ -1.83
TCF4-213ENST00000562543 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 A8MWV9 139 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 E7EUB6 86 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 IL4P05112 153 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 NMUP48645 174 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 VMA21Q3ZAQ7 101 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 ZNF493Q6ZR52 646 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 LINC00173Q6ZV60 143 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 OR1L8Q8NGR8 309 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 OR13C6PQ8NH95 151 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 LINC00479Q96M42 142 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 C20orf78Q9BR46 151 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 Q9HAA7 133 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 NHP2Q9NX24 153 aaKnown RBP3.59□□□□□ -1.83
TCF4-213ENST00000562543 PRNDQ9UKY0 176 aa3.59□□□□□ -1.83
TCF4-213ENST00000562543 TRBV25-1A0A075B6N4 114 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 IGHV3-66A0A0C4DH42 116 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 IBA57-AS1B1ANH7 110 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 INS-IGF2F8WCM5 200 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 H7C1H1 209 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 J3KT08 172 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 DPM2O94777 84 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 ACTL6BO94805 426 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 LTAP01374 205 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 IGKCP01834 107 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 CRYGAP11844 174 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 DEFA4P12838 97 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 PLNP26678 52 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 SUB1P53999 127 aaKnown RBP eCLIP3.58□□□□□ -1.84
TCF4-213ENST00000562543 HSPE1P61604 102 aaKnown RBP3.58□□□□□ -1.84
TCF4-213ENST00000562543 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
TCF4-213ENST00000562543 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
TCF4-213ENST00000562543 CACNG7P62955 275 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 LYPD5Q6UWN5 251 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 SH2D6Q7Z4S9 175 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 ORMDL3Q8N138 153 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 LINC00612Q8N6U2 182 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 OR8A1Q8NGG7 326 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 IMUPQ9GZP8 106 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 NXT2Q9NPJ8 142 aaKnown RBP3.58□□□□□ -1.84
TCF4-213ENST00000562543 TP73-AS1Q9UF72 201 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
TCF4-213ENST00000562543 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
TCF4-213ENST00000562543 COX7A2P2O60397 106 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 SCGB1C2P0DMR2 95 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 UBE2D3P61077 147 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 UBE2D2P62837 147 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 PRR3P79522 188 aaKnown RBP3.57□□□□□ -1.84
TCF4-213ENST00000562543 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 FAM167A-AS1Q96KT0 104 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 NAA38Q9BRA0 125 aaKnown RBP3.57□□□□□ -1.84
TCF4-213ENST00000562543 SLC25A39Q9BZJ4 359 aaPredicted RBP3.57□□□□□ -1.84
TCF4-213ENST00000562543 EPDR1Q9UM22 224 aa3.57□□□□□ -1.84
TCF4-213ENST00000562543 CSDC2Q9Y534 153 aaKnown RBP3.57□□□□□ -1.84
TCF4-213ENST00000562543 TRBV7-3A0A075B6L6 115 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 MYMXA0A1B0GTQ4 84 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 A0A1B0GUV1 79 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 LINC01549A6NIU2 74 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
TCF4-213ENST00000562543 SNAI2O43623 268 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 NCR2O95944 276 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 NPYP01303 97 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 CTSGP08311 255 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 CHTF8P0CG12 524 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 SAA1P0DJI8 122 aaPredicted RBP3.56□□□□□ -1.84
TCF4-213ENST00000562543 RPL13AP40429 203 aaKnown RBP3.56□□□□□ -1.84
TCF4-213ENST00000562543 RPL27AP46776 148 aaKnown RBP3.56□□□□□ -1.84
TCF4-213ENST00000562543 PRCDQ00LT1 54 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 C10orf113Q5VZT2 155 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 Q86TA4 180 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 PCP2Q8IVA1 136 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 THAP8Q8NA92 274 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 FXYD5Q96DB9 178 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 ZC2HC1AQ96GY0 325 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
TCF4-213ENST00000562543 F11RQ9Y624 299 aaKnown RBP3.56□□□□□ -1.84
TCF4-213ENST00000562543 A0A096LNJ9 63 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 TRAV12-1A0A0B4J245 112 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 TRBV7-7A0A0K0K1E9 115 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 K7EMI3 77 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 K7ERJ3 54 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 FCER1GP30273 86 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 UBE2D1P51668 147 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 ANXA2RQ3ZCQ2 193 aa3.55□□□□□ -1.84
TCF4-213ENST00000562543 MEIG1Q5JSS6 88 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms