RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 HYDINQ4G0P3 5121 aa-0.78□□□□□ -2.53
USP8-218ENST00000561330 HMGXB3Q12766 1538 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 TRBV7-3A0A075B6L6 115 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 HMGN4O00479 90 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 SFT2D2O95562 160 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 MGPP08493 103 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 UBA52P62987 128 aaKnown RBP-0.79□□□□□ -2.54
USP8-218ENST00000561330 C12orf73Q69YU5 71 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 AKAP14Q86UN6 197 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 Q8N8P6 123 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 DPH3Q96FX2 82 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 USMG5Q96IX5 58 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 CCDC167Q9P0B6 97 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 ZFHX3Q15911 3703 aa-0.79□□□□□ -2.54
USP8-218ENST00000561330 LOC285095A0A1B0GVY8 99 aa-0.8□□□□□ -2.54
USP8-218ENST00000561330 CPSF4LA6NMK7 179 aaKnown RBP-0.8□□□□□ -2.54
USP8-218ENST00000561330 C10orf113Q5VZT2 155 aa-0.8□□□□□ -2.54
USP8-218ENST00000561330 TMEM263Q8WUH6 116 aaKnown RBP-0.8□□□□□ -2.54
USP8-218ENST00000561330 KIAA0556O60303 1618 aa-0.8□□□□□ -2.54
USP8-218ENST00000561330 RYR1P21817 5038 aa-0.8□□□□□ -2.54
USP8-218ENST00000561330 SETBP1Q9Y6X0 1596 aa-0.81□□□□□ -2.54
USP8-218ENST00000561330 LINC00959A0A1B0GUT2 108 aa-0.81□□□□□ -2.54
USP8-218ENST00000561330 DEFB112Q30KQ8 113 aa-0.81□□□□□ -2.54
USP8-218ENST00000561330 MRPL54Q6P161 138 aaKnown RBP-0.81□□□□□ -2.54
USP8-218ENST00000561330 LSM10Q969L4 123 aaKnown RBP-0.81□□□□□ -2.54
USP8-218ENST00000561330 MYOM3Q5VTT5 1437 aa-0.81□□□□□ -2.54
USP8-218ENST00000561330 PDCD11Q14690 1871 aaKnown RBP-0.82□□□□□ -2.54
USP8-218ENST00000561330 PAPPA2Q9BXP8 1791 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 B2MP61769 119 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 SMIM21Q3B7S5 101 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 ANP32BQ92688 251 aaKnown RBP-0.82□□□□□ -2.54
USP8-218ENST00000561330 PFDN5Q99471 154 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 SERP1Q9Y6X1 66 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 ANKRD36A6QL64 1941 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 AKAP9Q99996 3911 aa-0.82□□□□□ -2.54
USP8-218ENST00000561330 TULP4Q9NRJ4 1543 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 CEP152O94986 1710 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.83□□□□□ -2.542e-6■■■■■ 37.9
USP8-218ENST00000561330 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.83□□□□□ -2.54
USP8-218ENST00000561330 CFTRP13569 1480 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 MIF4GDA9UHW6 222 aaKnown RBP-0.83□□□□□ -2.54
USP8-218ENST00000561330 FAM25AB3EWG3 89 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 FAM25CB3EWG5 89 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 FAM25GB3EWG6 89 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 CHKB-CPT1BH3BT56 60 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 IGLC1P0CG04 106 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 ARPC4P59998 168 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 LINC01600Q96MT4 127 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 NAA60Q9H7X0 242 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 NXT2Q9NPJ8 142 aaKnown RBP-0.83□□□□□ -2.54
USP8-218ENST00000561330 SONP18583 2426 aaKnown RBP-0.83□□□□□ -2.54
USP8-218ENST00000561330 BIRC6Q9NR09 4857 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 HTTP42858 3142 aa-0.83□□□□□ -2.54
USP8-218ENST00000561330 KIAA1109Q2LD37 5005 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 MAGI1Q96QZ7 1491 aaPredicted RBP-0.84□□□□□ -2.54
USP8-218ENST00000561330 MYOZ3Q8TDC0 251 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 PPP3R2Q96LZ3 170 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 PRO1933Q9H354 126 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 RERGLQ9H628 205 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 UQCR10Q9UDW1 63 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 ARL2-SNX15V9GYD0 113 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 TACC2O95359 2948 aa-0.84□□□□□ -2.54
USP8-218ENST00000561330 USP9YO00507 2555 aaPredicted RBP-0.85□□□□□ -2.54
USP8-218ENST00000561330 GRIN2AQ12879 1464 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 PKD1P98161 4303 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 SSSCA1O60232 199 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 DR1Q01658 176 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 CPSF1Q10570 1443 aaKnown RBP-0.85□□□□□ -2.55
USP8-218ENST00000561330 WHAMMP3Q1A5X7 153 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 FAM223AQ8IWN6 122 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 DNAH3Q8TD57 4116 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 HIVEP1P15822 2718 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 MUC17Q685J3 4493 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 MYOM1P52179 1685 aa-0.85□□□□□ -2.55
USP8-218ENST00000561330 FAT3Q8TDW7 4589 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 FOCADQ5VW36 1801 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 SEC11AP67812 179 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 CATR1Q13166 79 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 H1FX-AS1Q4G0G2 97 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 MEIG1Q5JSS6 88 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 LCN9Q8WX39 176 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 FAM167A-AS1Q96KT0 104 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 SPRR4Q96PI1 79 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 SPANXDQ9BXN6 97 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 VPS13DQ5THJ4 4388 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 A0A0G2JMZ2 1700 aa-0.86□□□□□ -2.55
USP8-218ENST00000561330 ARHGEF5Q12774 1597 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 SFTA2Q6UW10 78 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 C8orf59Q8N0T1 100 aaPredicted RBP-0.87□□□□□ -2.55
USP8-218ENST00000561330 C9orf62Q8N4C0 152 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 CRIPTQ9P021 101 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 LINC00474Q9P2X8 69 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 XRN1Q8IZH2 1706 aaKnown RBP-0.87□□□□□ -2.55
USP8-218ENST00000561330 MARF1Q9Y4F3 1742 aaKnown RBP-0.87□□□□□ -2.55
USP8-218ENST00000561330 LYSTQ99698 3801 aa-0.87□□□□□ -2.55
USP8-218ENST00000561330 TET3O43151 1660 aa-0.88□□□□□ -2.55
USP8-218ENST00000561330 SCN7AQ01118 1682 aa-0.88□□□□□ -2.55
USP8-218ENST00000561330 COL14A1Q05707 1796 aaKnown RBP-0.88□□□□□ -2.55
USP8-218ENST00000561330 PHLPP1O60346 1717 aa-0.88□□□□□ -2.55
USP8-218ENST00000561330 NUP188Q5SRE5 1749 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms