RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 A0A0G2JMZ2 1700 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 TCTAP57738 103 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 LELP1Q5T871 98 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 STX12Q86Y82 276 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 THEM6Q8WUY1 208 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 BANF2Q9H503 90 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 CDKN2A-AS1Q9UH64 79 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 ARHGEF10O15013 1369 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 LRBAP50851 2863 aa-2.41□□□□□ -2.8
CASC4-211ENST00000561305 CMPK1P30085 196 aa-2.42□□□□□ -2.8
CASC4-211ENST00000561305 PPP1R2P3Q6NXS1 205 aa-2.42□□□□□ -2.8
CASC4-211ENST00000561305 HEPN1Q6WQI6 88 aa-2.42□□□□□ -2.8
CASC4-211ENST00000561305 CALML5Q9NZT1 146 aa-2.42□□□□□ -2.8
CASC4-211ENST00000561305 DNAH17Q9UFH2 4485 aa-2.42□□□□□ -2.8
CASC4-211ENST00000561305 ZFHX3Q15911 3703 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 TLN2Q9Y4G6 2542 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 TRBV20-1A0A075B6N2 111 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 TRAV30A0A087WSZ9 112 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 IGLC7A0M8Q6 106 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 CCL22O00626 93 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 C10orf128Q5T292 105 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 LINC01600Q96MT4 127 aa-2.43□□□□□ -2.8
CASC4-211ENST00000561305 QRICH2Q9H0J4 1663 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 IFT140Q96RY7 1462 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 SMG1Q96Q15 3661 aaKnown RBP-2.44□□□□□ -2.8
CASC4-211ENST00000561305 PFDN1O60925 122 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 MGPP08493 103 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 PAEPP09466 180 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 RPS28P62857 69 aaKnown RBP-2.44□□□□□ -2.8
CASC4-211ENST00000561305 FDCSPQ8NFU4 85 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 SPRR4Q96PI1 79 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 AQP10Q96PS8 301 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 MRPL34Q9BQ48 92 aaKnown RBP-2.44□□□□□ -2.8
CASC4-211ENST00000561305 NCOA3Q9Y6Q9 1424 aa-2.44□□□□□ -2.8
CASC4-211ENST00000561305 DYNC2H1Q8NCM8 4307 aaKnown RBP-2.45□□□□□ -2.8
CASC4-211ENST00000561305 A0A1W2PRE2 83 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 DPM2O94777 84 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 MT1EP04732 61 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 MRPS25P82663 173 aaKnown RBP-2.45□□□□□ -2.8
CASC4-211ENST00000561305 TMEM78Q5T7P6 136 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 MIC13Q5XKP0 118 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 MAGOHBQ96A72 148 aaKnown RBP-2.45□□□□□ -2.8
CASC4-211ENST00000561305 FAM167A-AS1Q96KT0 104 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 HIGD1BQ9P298 99 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 OVOS2A0A0G2JMS6 1433 aa-2.45□□□□□ -2.8
CASC4-211ENST00000561305 TMEM2Q9UHN6 1383 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 HCG22E2RYF7 251 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 SFT2D2O95562 160 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 MT-ND4LP03901 98 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 IL5P05113 134 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 S100A7L2Q5SY68 101 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 Q6ZUT4 128 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 CTAGE3PQ8IX95 158 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 SEC11CQ9BY50 192 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 SAR1AQ9NR31 198 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 BCORQ6W2J9 1755 aa-2.46□□□□□ -2.8
CASC4-211ENST00000561305 PPIP5K1Q6PFW1 1433 aa-2.47□□□□□ -2.8
CASC4-211ENST00000561305 SERPINB1P30740 379 aa-2.47□□□□□ -2.8
CASC4-211ENST00000561305 TTC9CQ8N5M4 171 aa-2.47□□□□□ -2.8
CASC4-211ENST00000561305 BTAF1O14981 1849 aa-2.47□□□□□ -2.81
CASC4-211ENST00000561305 XRN1Q8IZH2 1706 aaKnown RBP-2.48□□□□□ -2.81
CASC4-211ENST00000561305 SYNMO15061 1565 aa-2.48□□□□□ -2.81
CASC4-211ENST00000561305 PRG4Q92954 1404 aaPredicted RBP-2.48□□□□□ -2.81
CASC4-211ENST00000561305 TRAV13-2A0A0B4J235 113 aa-2.48□□□□□ -2.81
CASC4-211ENST00000561305 FGF7P21781 194 aa-2.48□□□□□ -2.81
CASC4-211ENST00000561305 UBA52P62987 128 aaKnown RBP-2.48□□□□□ -2.81
CASC4-211ENST00000561305 TMEM244Q5VVB8 128 aa-2.48□□□□□ -2.81
CASC4-211ENST00000561305 SELENOSQ9BQE4 189 aa-2.48□□□□□ -2.81
CASC4-211ENST00000561305 BPTFQ12830 3046 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 C1orf167Q5SNV9 1468 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 OR8I2Q8N0Y5 310 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 MNS1Q8NEH6 495 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 OR9Q1Q8NGQ5 310 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 MT1LQ93083 61 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 DYNLRB1Q9NP97 96 aa-2.49□□□□□ -2.81
CASC4-211ENST00000561305 HMGN4O00479 90 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 NDUFB6O95139 128 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 SEC11AP67812 179 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 TAC4Q86UU9 113 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 LCN9Q8WX39 176 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 SPTSSAQ969W0 71 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 MGST2Q99735 147 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 PRO1933Q9H354 126 aa-2.5□□□□□ -2.81
CASC4-211ENST00000561305 EIF3AQ14152 1382 aaKnown RBP-2.5□□□□□ -2.81
CASC4-211ENST00000561305 DOCK2Q92608 1830 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 LOC100130705A0A1B0GUX0 176 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 SNCGO76070 127 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 SMR3BP02814 79 aaPredicted RBP-2.51□□□□□ -2.81
CASC4-211ENST00000561305 MT1GP13640 62 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 KRTAP20-1Q3LI63 56 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 FAIMQ9NVQ4 179 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 DNAH10Q8IVF4 4471 aa-2.51□□□□□ -2.81
CASC4-211ENST00000561305 ZNF518AQ6AHZ1 1483 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 ITPR2Q14571 2701 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 ALKQ9UM73 1620 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 MYOM1P52179 1685 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 LOC285095A0A1B0GVY8 99 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 H7BZZ5 65 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 IGLC1P0CG04 106 aa-2.52□□□□□ -2.81
CASC4-211ENST00000561305 HIST1H1DP16402 221 aaKnown RBP-2.52□□□□□ -2.81
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms